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The map label for this gene is secF [H]

Identifier: 18310923

GI number: 18310923

Start: 2223573

End: 2224442

Strand: Reverse

Name: secF [H]

Synonym: CPE1941

Alternate gene names: 18310923

Gene position: 2224442-2223573 (Counterclockwise)

Preceding gene: 18310924

Following gene: 18310922

Centisome position: 73.38

GC content: 28.62

Gene sequence:

>870_bases
ATGCTTAAAATTGTAGAGAAGAAGAAAATATGGTTTACTATATCAATTCTTATAATTGTTATAGGTTTTGGATTTATGTT
TACTAAAGGTATGAACTTTGGAATCGACTTTAGAGGGGGTACTCAGGTTGTAATAAACATGGGTACAGATTTTAATAAAA
CTGATGTTGATAAAATTGTAGATGAATATTCAAAGGATGCCGTTACAAATCAAGTTAATGGTACTGAACTTCAAATAAAA
GCAAAAGAGTTAAATAGTTCTCAAGTTAATGATATCTTTAAGGCTCTTAAAGAAAAATACGATTTAAAAGATGATGCCTT
AGTATCACAAAATGAAATTGGGGCTTCAGTTGGAAGAGATTTAACAACAAATGCCATAGTAGCTCTTGCGATAGCAGTAA
TAGGTATGCTTATATACGTAATTATAAGATTTGAATTTTCTTTTGGTATTGCAGCTATAATAGCTCTATTACACGATGTA
TTAATAACTATAAGTGTTTATGCTGTATTTGGAATAACAATAAATACTCCATTTATAGCGGCTATACTTACAATAGTAGG
TTATTCTATAAATGATACAATAGTTATATTTGATAGAATAAGAGAAAATAGAAAAAAACTTAGAGGGAAATCTGTGGAAG
AGATTGCAGACATTAGTATCACTCAAACAATGTCAAGATCTATAAATACAACACTTACAACTTTAATCACTATAGTTTGT
GTTTATATATTTGTTCCTACAGTTAGAGATTTTGCTTTTCCGTTAATAGTTGGTATAGCATCAGGAGCTTGTTCTTCAAT
ATTTATAGCAAGTCCAATTTGGTGTATTTTAGCTAACAGACAAAAAAATAAAAAGGCAATAAATAAGTAA

Upstream 100 bases:

>100_bases
ACCGCTATAATAATGACAAGATTCTTTATGAATTTAGGATTCAACATGGGAATATTAAATAAGCCTTCAATGTTTGGTCG
TATAAAAGGAGGTAGACATA

Downstream 100 bases:

>100_bases
TAGTATAAAAATGCTAAAAGTTTTATAACTTTTAGCATTTTTTTTTATTTTAATTAGAATTTTTATTACATTTTAAGAAA
AATAGGAGAAAAGTAATAAA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MLKIVEKKKIWFTISILIIVIGFGFMFTKGMNFGIDFRGGTQVVINMGTDFNKTDVDKIVDEYSKDAVTNQVNGTELQIK
AKELNSSQVNDIFKALKEKYDLKDDALVSQNEIGASVGRDLTTNAIVALAIAVIGMLIYVIIRFEFSFGIAAIIALLHDV
LITISVYAVFGITINTPFIAAILTIVGYSINDTIVIFDRIRENRKKLRGKSVEEIADISITQTMSRSINTTLTTLITIVC
VYIFVPTVRDFAFPLIVGIASGACSSIFIASPIWCILANRQKNKKAINK

Sequences:

>Translated_289_residues
MLKIVEKKKIWFTISILIIVIGFGFMFTKGMNFGIDFRGGTQVVINMGTDFNKTDVDKIVDEYSKDAVTNQVNGTELQIK
AKELNSSQVNDIFKALKEKYDLKDDALVSQNEIGASVGRDLTTNAIVALAIAVIGMLIYVIIRFEFSFGIAAIIALLHDV
LITISVYAVFGITINTPFIAAILTIVGYSINDTIVIFDRIRENRKKLRGKSVEEIADISITQTMSRSINTTLTTLITIVC
VYIFVPTVRDFAFPLIVGIASGACSSIFIASPIWCILANRQKNKKAINK
>Mature_289_residues
MLKIVEKKKIWFTISILIIVIGFGFMFTKGMNFGIDFRGGTQVVINMGTDFNKTDVDKIVDEYSKDAVTNQVNGTELQIK
AKELNSSQVNDIFKALKEKYDLKDDALVSQNEIGASVGRDLTTNAIVALAIAVIGMLIYVIIRFEFSFGIAAIIALLHDV
LITISVYAVFGITINTPFIAAILTIVGYSINDTIVIFDRIRENRKKLRGKSVEEIADISITQTMSRSINTTLTTLITIVC
VYIFVPTVRDFAFPLIVGIASGACSSIFIASPIWCILANRQKNKKAINK

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=286, Percent_Identity=33.2167832167832, Blast_Score=154, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 31935; Mature: 31935

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIVEKKKIWFTISILIIVIGFGFMFTKGMNFGIDFRGGTQVVINMGTDFNKTDVDKIV
CCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCHHHHHH
DEYSKDAVTNQVNGTELQIKAKELNSSQVNDIFKALKEKYDLKDDALVSQNEIGASVGRD
HHHHHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
LTTNAIVALAIAVIGMLIYVIIRFEFSFGIAAIIALLHDVLITISVYAVFGITINTPFIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHH
AILTIVGYSINDTIVIFDRIRENRKKLRGKSVEEIADISITQTMSRSINTTLTTLITIVC
HHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYIFVPTVRDFAFPLIVGIASGACSSIFIASPIWCILANRQKNKKAINK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHEEECCCCCCCCCCCC
>Mature Secondary Structure
MLKIVEKKKIWFTISILIIVIGFGFMFTKGMNFGIDFRGGTQVVINMGTDFNKTDVDKIV
CCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCHHHHHH
DEYSKDAVTNQVNGTELQIKAKELNSSQVNDIFKALKEKYDLKDDALVSQNEIGASVGRD
HHHHHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
LTTNAIVALAIAVIGMLIYVIIRFEFSFGIAAIIALLHDVLITISVYAVFGITINTPFIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHH
AILTIVGYSINDTIVIFDRIRENRKKLRGKSVEEIADISITQTMSRSINTTLTTLITIVC
HHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYIFVPTVRDFAFPLIVGIASGACSSIFIASPIWCILANRQKNKKAINK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]