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The map label for this gene is recJ [H]

Identifier: 18310922

GI number: 18310922

Start: 2222518

End: 2223372

Strand: Reverse

Name: recJ [H]

Synonym: CPE1940

Alternate gene names: 18310922

Gene position: 2223372-2222518 (Counterclockwise)

Preceding gene: 18310923

Following gene: 18310921

Centisome position: 73.34

GC content: 26.55

Gene sequence:

>855_bases
ATGCAGAAGGCTTGGAAAAACATATATTGCACTAATTACATATCAGGGTATAGCCCTTTTAACATTAAAAATATGAATAA
AGCAATAGAAAGACTAGCATCTGCAATTAACAATAGAGAAAAGATAGTTATATATGGTGGATGTGATTTAGATTCCATAT
GTGCAATATCATCTTTAATGCTTATACTAAAGTATTTAAATGCTGATGTTGAATATTGTGTAAGTTCAGAACATGAAGAG
AAAAATTATGATATAGATGAATATACTTTAAGAGAAGATATTGCTTTTTTAGGTGCAGAACTTTTAATAACAGTAGGTTG
TGGCCTTAAAAATAAAGAGGTGGAGAATCTCTGTAATAGATTTAATATAGATCTAATAATAATGGAAAATAAACGCACAA
AATGCATATATGATTCAACATATATAAACCCAAGTGAAGAAAAGTGTTCATATAGATATAAGGATTTGACTAATTCGGGG
TTAACTTTTAAGTTAATGCAAGCTATTGCTATATATTATAACATGAAAAGAATAAATAAGTATTTAGATTTAATACTTAT
AGGTAGTGTTTCAAAGAACGTTAAAAATAAAGGGGAAAATGGAATAATATTAAAGGAAGGCATTCAATATTTAAGATATA
CTAATAGTATAGGATTGAATGCTATTAAGAGTTTCTTTAATATTAGTGATATAAATATAGATAGTATTAATAAAATAGTT
AATGAGATAACTCCAAGAGAAGGTGCCATTAGTAAAAAAGATAACGCGAAGATAGTTGTGGAGTTATTAACTACAAATGA
TAAGGATAGAGCGGAGCAAATAACTAAATATATTTATAATGAAAAAATAAGGTAG

Upstream 100 bases:

>100_bases
AATGACTAATGAATACGTATTTATTTGAAAAGTATTTGTCAAAAAGGTAATTTTAAATTATAATATACTTGTTTTCTTAA
TTTTATGGAGGAGTTAAATT

Downstream 100 bases:

>100_bases
TAATTAAAAATTTATATATATTTATTGATTTTGGAGGGAAAGTAATGAGTTTAAAGGATAAAATAAGAGTTATAGAAGAT
TTTCCTAAGAAGGGAATAAG

Product: DHH domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQKAWKNIYCTNYISGYSPFNIKNMNKAIERLASAINNREKIVIYGGCDLDSICAISSLMLILKYLNADVEYCVSSEHEE
KNYDIDEYTLREDIAFLGAELLITVGCGLKNKEVENLCNRFNIDLIIMENKRTKCIYDSTYINPSEEKCSYRYKDLTNSG
LTFKLMQAIAIYYNMKRINKYLDLILIGSVSKNVKNKGENGIILKEGIQYLRYTNSIGLNAIKSFFNISDINIDSINKIV
NEITPREGAISKKDNAKIVVELLTTNDKDRAEQITKYIYNEKIR

Sequences:

>Translated_284_residues
MQKAWKNIYCTNYISGYSPFNIKNMNKAIERLASAINNREKIVIYGGCDLDSICAISSLMLILKYLNADVEYCVSSEHEE
KNYDIDEYTLREDIAFLGAELLITVGCGLKNKEVENLCNRFNIDLIIMENKRTKCIYDSTYINPSEEKCSYRYKDLTNSG
LTFKLMQAIAIYYNMKRINKYLDLILIGSVSKNVKNKGENGIILKEGIQYLRYTNSIGLNAIKSFFNISDINIDSINKIV
NEITPREGAISKKDNAKIVVELLTTNDKDRAEQITKYIYNEKIR
>Mature_284_residues
MQKAWKNIYCTNYISGYSPFNIKNMNKAIERLASAINNREKIVIYGGCDLDSICAISSLMLILKYLNADVEYCVSSEHEE
KNYDIDEYTLREDIAFLGAELLITVGCGLKNKEVENLCNRFNIDLIIMENKRTKCIYDSTYINPSEEKCSYRYKDLTNSG
LTFKLMQAIAIYYNMKRINKYLDLILIGSVSKNVKNKGENGIILKEGIQYLRYTNSIGLNAIKSFFNISDINIDSINKIV
NEITPREGAISKKDNAKIVVELLTTNDKDRAEQITKYIYNEKIR

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 32634; Mature: 32634

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKAWKNIYCTNYISGYSPFNIKNMNKAIERLASAINNREKIVIYGGCDLDSICAISSLM
CCCCHHCCEEHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
LILKYLNADVEYCVSSEHEEKNYDIDEYTLREDIAFLGAELLITVGCGLKNKEVENLCNR
HHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
FNIDLIIMENKRTKCIYDSTYINPSEEKCSYRYKDLTNSGLTFKLMQAIAIYYNMKRINK
CCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YLDLILIGSVSKNVKNKGENGIILKEGIQYLRYTNSIGLNAIKSFFNISDINIDSINKIV
HHHHHEECCHHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHH
NEITPREGAISKKDNAKIVVELLTTNDKDRAEQITKYIYNEKIR
HHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKAWKNIYCTNYISGYSPFNIKNMNKAIERLASAINNREKIVIYGGCDLDSICAISSLM
CCCCHHCCEEHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
LILKYLNADVEYCVSSEHEEKNYDIDEYTLREDIAFLGAELLITVGCGLKNKEVENLCNR
HHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
FNIDLIIMENKRTKCIYDSTYINPSEEKCSYRYKDLTNSGLTFKLMQAIAIYYNMKRINK
CCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YLDLILIGSVSKNVKNKGENGIILKEGIQYLRYTNSIGLNAIKSFFNISDINIDSINKIV
HHHHHEECCHHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHH
NEITPREGAISKKDNAKIVVELLTTNDKDRAEQITKYIYNEKIR
HHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]