Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310910

Identifier: 18310910

GI number: 18310910

Start: 2209361

End: 2210347

Strand: Reverse

Name: 18310910

Synonym: CPE1928

Alternate gene names: NA

Gene position: 2210347-2209361 (Counterclockwise)

Preceding gene: 18310911

Following gene: 18310909

Centisome position: 72.91

GC content: 27.96

Gene sequence:

>987_bases
GTGAACTTTTATAGGAATTTACCTATAAAGATTTTTATGAAATTTATAGATTTTCATTGTGATACAGCATCACGTATGCT
TCAAGAAAATAAAAAGCTTTTTAGAAATGATTTGAAGGTTGATATAAATAAATTAAGAGAAGGAGAGGCTTTAGCACAAT
TTTTTGCTTTGTTTATAAATAAAGAATGTAATTCTGATACTTATTCTTATTGCAAAGAAATGCTACAGAATTTTAAAAGA
GAAATAAATGAGAATTCAAGAGATATAGTCTTATGCAGAAATATAAGTGATTTAGAAAAGGCAGAGAAAGAGGATAAAAT
AGGGGCCTTTATAACTATTGAAGAGGGAGATGCAATTAAGGGTAATATTGAAAAGTTAAGGGAGTTTAAAGAAGAGGGAG
TTTCTTTAATAACCTTAACTTGGAATTATATAAATGACTTAGGATATCCAAATTATGAGTTTAAATACAAGGATAAGGGT
CTTACTAAAAAGGGTATAGAAGTTGTGGAAGAAATGAATAATCTAGGAATGTTAATAGATGTTTCTCATCTTTCTGATGG
AGGATTCTATGATGCAATAAAATATTCAAAGAGTCCAATTATAGCATCTCATTCTAATAGTAGAACAAAGACTAATCATA
GCAGAAATTTAACTGACCATATGATTAAAGAGTTAGCTAATAGTGGTGGGGTAACAGGAATAAATTTTTGCAATGCTTTC
TTAAAAGAAGAGTGGGAAGAGGATTTAAATTTAGCTTCCATAAGAAATATGGTTAGACATATAAAACACATAAGAAATAT
TGGGGGAATAGATGTTATTTCCTTAGGATCTGATTTTGATGGTATAGAAAATGAAGTTGAAATTAAAGATTCAAGTAAGA
TGAATTTATTATTAAATGCTTTGGAAATTGAAGGATTTAAAGGGGAGGAAATAGAGAAAATATATTATAAGAATGCAAAG
AGAATAATAAGAGATGTTTTAAGATAG

Upstream 100 bases:

>100_bases
TTTTTTAATAATAATAGTATTACAAGAGAATAATTTAAAAAGAGAAAAATTTTTGATATAGTTTATATTGTGAAAATATT
CATATTACTAGATGAAAGAG

Downstream 100 bases:

>100_bases
TCTTATAACTTAGTTATATAATGATTTATGAAAATAAACTTTAATACAACTTTTAAGAATTTTAATGTTATGCAGAAAAG
GATGAAGGATTAATGGAGAA

Product: dipeptidase family protein

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNFYRNLPIKIFMKFIDFHCDTASRMLQENKKLFRNDLKVDINKLREGEALAQFFALFINKECNSDTYSYCKEMLQNFKR
EINENSRDIVLCRNISDLEKAEKEDKIGAFITIEEGDAIKGNIEKLREFKEEGVSLITLTWNYINDLGYPNYEFKYKDKG
LTKKGIEVVEEMNNLGMLIDVSHLSDGGFYDAIKYSKSPIIASHSNSRTKTNHSRNLTDHMIKELANSGGVTGINFCNAF
LKEEWEEDLNLASIRNMVRHIKHIRNIGGIDVISLGSDFDGIENEVEIKDSSKMNLLLNALEIEGFKGEEIEKIYYKNAK
RIIRDVLR

Sequences:

>Translated_328_residues
MNFYRNLPIKIFMKFIDFHCDTASRMLQENKKLFRNDLKVDINKLREGEALAQFFALFINKECNSDTYSYCKEMLQNFKR
EINENSRDIVLCRNISDLEKAEKEDKIGAFITIEEGDAIKGNIEKLREFKEEGVSLITLTWNYINDLGYPNYEFKYKDKG
LTKKGIEVVEEMNNLGMLIDVSHLSDGGFYDAIKYSKSPIIASHSNSRTKTNHSRNLTDHMIKELANSGGVTGINFCNAF
LKEEWEEDLNLASIRNMVRHIKHIRNIGGIDVISLGSDFDGIENEVEIKDSSKMNLLLNALEIEGFKGEEIEKIYYKNAK
RIIRDVLR
>Mature_328_residues
MNFYRNLPIKIFMKFIDFHCDTASRMLQENKKLFRNDLKVDINKLREGEALAQFFALFINKECNSDTYSYCKEMLQNFKR
EINENSRDIVLCRNISDLEKAEKEDKIGAFITIEEGDAIKGNIEKLREFKEEGVSLITLTWNYINDLGYPNYEFKYKDKG
LTKKGIEVVEEMNNLGMLIDVSHLSDGGFYDAIKYSKSPIIASHSNSRTKTNHSRNLTDHMIKELANSGGVTGINFCNAF
LKEEWEEDLNLASIRNMVRHIKHIRNIGGIDVISLGSDFDGIENEVEIKDSSKMNLLLNALEIEGFKGEEIEKIYYKNAK
RIIRDVLR

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M19 family [H]

Homologues:

Organism=Homo sapiens, GI11641269, Length=302, Percent_Identity=27.1523178807947, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI193211608, Length=333, Percent_Identity=25.5255255255255, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI189458885, Length=297, Percent_Identity=25.2525252525253, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI4758190, Length=297, Percent_Identity=25.2525252525253, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI193211610, Length=333, Percent_Identity=25.8258258258258, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI221475880, Length=293, Percent_Identity=30.3754266211604, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI281362638, Length=299, Percent_Identity=31.7725752508361, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI281362636, Length=299, Percent_Identity=31.7725752508361, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI161083233, Length=294, Percent_Identity=29.2517006802721, Blast_Score=134, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008257 [H]

Pfam domain/function: PF01244 Peptidase_M19 [H]

EC number: NA

Molecular weight: Translated: 37943; Mature: 37943

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFYRNLPIKIFMKFIDFHCDTASRMLQENKKLFRNDLKVDINKLREGEALAQFFALFIN
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
KECNSDTYSYCKEMLQNFKREINENSRDIVLCRNISDLEKAEKEDKIGAFITIEEGDAIK
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCC
GNIEKLREFKEEGVSLITLTWNYINDLGYPNYEFKYKDKGLTKKGIEVVEEMNNLGMLID
CCHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEE
VSHLSDGGFYDAIKYSKSPIIASHSNSRTKTNHSRNLTDHMIKELANSGGVTGINFCNAF
ECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
LKEEWEEDLNLASIRNMVRHIKHIRNIGGIDVISLGSDFDGIENEVEIKDSSKMNLLLNA
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHH
LEIEGFKGEEIEKIYYKNAKRIIRDVLR
HHHCCCCCCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNFYRNLPIKIFMKFIDFHCDTASRMLQENKKLFRNDLKVDINKLREGEALAQFFALFIN
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
KECNSDTYSYCKEMLQNFKREINENSRDIVLCRNISDLEKAEKEDKIGAFITIEEGDAIK
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCC
GNIEKLREFKEEGVSLITLTWNYINDLGYPNYEFKYKDKGLTKKGIEVVEEMNNLGMLID
CCHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEE
VSHLSDGGFYDAIKYSKSPIIASHSNSRTKTNHSRNLTDHMIKELANSGGVTGINFCNAF
ECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
LKEEWEEDLNLASIRNMVRHIKHIRNIGGIDVISLGSDFDGIENEVEIKDSSKMNLLLNA
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHH
LEIEGFKGEEIEKIYYKNAKRIIRDVLR
HHHCCCCCCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1313537 [H]