| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310894
Identifier: 18310894
GI number: 18310894
Start: 2190592
End: 2191122
Strand: Direct
Name: 18310894
Synonym: CPE1912
Alternate gene names: NA
Gene position: 2190592-2191122 (Clockwise)
Preceding gene: 18310891
Following gene: 18310895
Centisome position: 72.26
GC content: 25.05
Gene sequence:
>531_bases ATGTATGATAGCACATTAGAATTAGCTGAGAATAAATTACTTCTTTTATATATAATAAAGTCAATAAAATATCCTATATC TAACACACAATTAACAGATATAGTTTTAGAAAATAGTTTTATAAATTATTTTATGTTACAGCAATATGTATCTGAATTAA TTTCTTCTGAGTTCTTAGAATATAAAACTCAAGATGATGATAAAGAAATCATAGTACTTACGGAAAAGGGAGATAAGGTA CTATTCTTCTTTAAAGATAGAATATCTCCAAACAAATTAAACCTTATAGATGAATATGTACGCAAGCATGTTGAAAAAAT AAAAAAAGAATTAAGTATATCTGCTGATTATACTGTTGGAGAAGACAGTTCTTTCATAGTAAATCTTAAAGCAATAGAAA ATAATACTATTCTAATTGATTTAAATGTAAGCGTTCCTTCCAAAACTGAAGCAAAAGCTATTTGCAACAAATGGGAAAAC AATTCTTCCGATATATATAACAAAATAATTCATGCTCTTATAGAAGATTAA
Upstream 100 bases:
>100_bases ACTCCTTAATATTTAATATTAATCAAATAACTTTATTATCTTAAAACATATATGGTATAATAGGATTATTATTTCAAAAC AGTTATGGAGGAAAACATAA
Downstream 100 bases:
>100_bases TAATCCTGCTATTATTATTAGCAAAAATCGTTATAAAATTTATATAATTTAGGGGGAAAACATAATTGTTTAAAAAACAT AATTTTCACTTTAATTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLEYKTQDDDKEIIVLTEKGDKV LFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVGEDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWEN NSSDIYNKIIHALIED
Sequences:
>Translated_176_residues MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLEYKTQDDDKEIIVLTEKGDKV LFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVGEDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWEN NSSDIYNKIIHALIED >Mature_176_residues MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLEYKTQDDDKEIIVLTEKGDKV LFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVGEDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWEN NSSDIYNKIIHALIED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20413; Mature: 20413
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLE CCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEHEEECCCHHHHHHHHHHHHHHHHHHHHH YKTQDDDKEIIVLTEKGDKVLFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVG CCCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEC EDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWENNSSDIYNKIIHALIED CCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MYDSTLELAENKLLLLYIIKSIKYPISNTQLTDIVLENSFINYFMLQQYVSELISSEFLE CCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEHEEECCCHHHHHHHHHHHHHHHHHHHHH YKTQDDDKEIIVLTEKGDKVLFFFKDRISPNKLNLIDEYVRKHVEKIKKELSISADYTVG CCCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEC EDSSFIVNLKAIENNTILIDLNVSVPSKTEAKAICNKWENNSSDIYNKIIHALIED CCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA