Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is spoIIIAD [H]

Identifier: 18310812

GI number: 18310812

Start: 2106190

End: 2106576

Strand: Reverse

Name: spoIIIAD [H]

Synonym: CPE1830

Alternate gene names: 18310812

Gene position: 2106576-2106190 (Counterclockwise)

Preceding gene: 18310813

Following gene: 18310811

Centisome position: 69.49

GC content: 27.65

Gene sequence:

>387_bases
ATGGATGTAGTTATACAAGTAATAAGCTTTGTACTAATAAGTTTATTTTTATATCTAGTTTTAAAAGATAATAAGAGCAC
CTTTGCAGTTTTTCTTCTTTTAGGAGCTGGCATAGTAATTTTTCTTTTTGTAATGCCTTATGTTAATGAAATAATAGCAT
TTATGCAGGATATAGCAAGAGAGTCTGGAATGGATTCATCATATATTGCTATAGTCATGAAAATTATTGCCATAGCATAT
CTTTCCACTTTTTGTAGTTATATATGTAATGATGCAGGGGTAACATTATTAGGTAAGAAGGTAGAGTTTACGGGAAAAAT
TATGATTCTATTATTAGCTATACCAATAATGGCTAATATTTTGAATTCTATTTTAAGTATAATGTAG

Upstream 100 bases:

>100_bases
GTTTTTATTTTAATAGATTTATGAAATATATTGAGAAGGAGGTGTCTATGACAGTAATCTAAGGTTTAAATAAAGCAAAA
GATTACTGGCAAAATGAAAT

Downstream 100 bases:

>100_bases
GAGCTAAGATATGAAAAAGTTGATAAACATAATATTATTATCTCTTATCTTTGTATTTTGCTTTAACTTAAAAGTTTTGG
CGAATGATAACTTAGAGAGT

Product: stage III sporulation protein AD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MDVVIQVISFVLISLFLYLVLKDNKSTFAVFLLLGAGIVIFLFVMPYVNEIIAFMQDIARESGMDSSYIAIVMKIIAIAY
LSTFCSYICNDAGVTLLGKKVEFTGKIMILLLAIPIMANILNSILSIM

Sequences:

>Translated_128_residues
MDVVIQVISFVLISLFLYLVLKDNKSTFAVFLLLGAGIVIFLFVMPYVNEIIAFMQDIARESGMDSSYIAIVMKIIAIAY
LSTFCSYICNDAGVTLLGKKVEFTGKIMILLLAIPIMANILNSILSIM
>Mature_128_residues
MDVVIQVISFVLISLFLYLVLKDNKSTFAVFLLLGAGIVIFLFVMPYVNEIIAFMQDIARESGMDSSYIAIVMKIIAIAY
LSTFCSYICNDAGVTLLGKKVEFTGKIMILLLAIPIMANILNSILSIM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014211 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14142; Mature: 14142

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVIQVISFVLISLFLYLVLKDNKSTFAVFLLLGAGIVIFLFVMPYVNEIIAFMQDIAR
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESGMDSSYIAIVMKIIAIAYLSTFCSYICNDAGVTLLGKKVEFTGKIMILLLAIPIMANI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
LNSILSIM
HHHHHHHC
>Mature Secondary Structure
MDVVIQVISFVLISLFLYLVLKDNKSTFAVFLLLGAGIVIFLFVMPYVNEIIAFMQDIAR
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESGMDSSYIAIVMKIIAIAYLSTFCSYICNDAGVTLLGKKVEFTGKIMILLLAIPIMANI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
LNSILSIM
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]