Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is spoIIIAC [H]

Identifier: 18310813

GI number: 18310813

Start: 2106664

End: 2106861

Strand: Reverse

Name: spoIIIAC [H]

Synonym: CPE1831

Alternate gene names: 18310813

Gene position: 2106861-2106664 (Counterclockwise)

Preceding gene: 18310814

Following gene: 18310812

Centisome position: 69.5

GC content: 28.28

Gene sequence:

>198_bases
ATGTCGGATTTATCTTTGATTTTTCAGATTGCAGGAGTTGGTATAGTGCTTGTTATACTAGATAAAGTTCTTGATCAAAG
TGGTAAAAAGGAGTATGCAACTTTAGCTAATATAGTTGGAGTAGTCATAATACTTACCATGATGATTCAACTTATAAGTA
GATTATTTTCTTCTGTTAAATCTATGTTTTTATTTTAA

Upstream 100 bases:

>100_bases
AATGATAGCTATTTTTCTTGTTTAGTCTAATAGATTTTTAGAAAAGAAATTTTACTTTTGGACTATTTAATAAGAGTTAA
GTTTTAGGGGGAGGCCATAT

Downstream 100 bases:

>100_bases
TAGATTTATGAAATATATTGAGAAGGAGGTGTCTATGACAGTAATCTAAGGTTTAAATAAAGCAAAAGATTACTGGCAAA
ATGAAATATGGATGTAGTTA

Product: stage III sporulation protein AC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVKSMFLF

Sequences:

>Translated_65_residues
MSDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVKSMFLF
>Mature_64_residues
SDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVKSMFLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009570 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7133; Mature: 7002

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMFLF
HHHCC
>Mature Secondary Structure 
SDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMFLF
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]