| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is spoIIIAC [H]
Identifier: 18310813
GI number: 18310813
Start: 2106664
End: 2106861
Strand: Reverse
Name: spoIIIAC [H]
Synonym: CPE1831
Alternate gene names: 18310813
Gene position: 2106861-2106664 (Counterclockwise)
Preceding gene: 18310814
Following gene: 18310812
Centisome position: 69.5
GC content: 28.28
Gene sequence:
>198_bases ATGTCGGATTTATCTTTGATTTTTCAGATTGCAGGAGTTGGTATAGTGCTTGTTATACTAGATAAAGTTCTTGATCAAAG TGGTAAAAAGGAGTATGCAACTTTAGCTAATATAGTTGGAGTAGTCATAATACTTACCATGATGATTCAACTTATAAGTA GATTATTTTCTTCTGTTAAATCTATGTTTTTATTTTAA
Upstream 100 bases:
>100_bases AATGATAGCTATTTTTCTTGTTTAGTCTAATAGATTTTTAGAAAAGAAATTTTACTTTTGGACTATTTAATAAGAGTTAA GTTTTAGGGGGAGGCCATAT
Downstream 100 bases:
>100_bases TAGATTTATGAAATATATTGAGAAGGAGGTGTCTATGACAGTAATCTAAGGTTTAAATAAAGCAAAAGATTACTGGCAAA ATGAAATATGGATGTAGTTA
Product: stage III sporulation protein AC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MSDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVKSMFLF
Sequences:
>Translated_65_residues MSDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVKSMFLF >Mature_64_residues SDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVKSMFLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009570 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7133; Mature: 7002
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMFLF HHHCC >Mature Secondary Structure SDLSLIFQIAGVGIVLVILDKVLDQSGKKEYATLANIVGVVIILTMMIQLISRLFSSVK CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMFLF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]