| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is spo0A [H]
Identifier: 18310795
GI number: 18310795
Start: 2091331
End: 2091783
Strand: Reverse
Name: spo0A [H]
Synonym: CPE1813
Alternate gene names: 18310795
Gene position: 2091783-2091331 (Counterclockwise)
Preceding gene: 18310796
Following gene: 18310794
Centisome position: 69.0
GC content: 29.36
Gene sequence:
>453_bases ATGAAGGAATCAAAAATATCTGTATTAATTGCTGATGATAACAAAGAGTTTTGCAATATTTTAAATGACTATTTATTAAG TCAAAGGGATATTGTTGTTACAGGAATTGCAAAGGATGGATTGGAAGCTTTAAAACTTATAGAAGAAAAACAACCAGATT TAGTTGTATTAGATATAATTATGCCACATTTAGATGGATTAGGTGTACTTGAAAGAATAAATTCTCTAGGATTAGAAAAA ACTCCAAGAGTAATAGTATTATCTGCTGTTGGACAAGACAAAATTACTCAAAGAGCTATAACTTTAGGGGCAGATTATTA TGTTGTTAAACCATTTGACATGGATGTATTTACAGAGAGAATAAGACAAATGTTTAATAGCACAATATCAGAGGAACCTA CAAATAGTAAACCTACAATTAGTGTAGTTGAAGGTTCAAAAAGTGAGGATTAA
Upstream 100 bases:
>100_bases TATTTTTTTTAGAAGGAAATAAATAAGTTTTGTCGAATATAGTTAAAGTAGAATAATTGTAAAAAAATGGATATATAAAG TTGGTTAAGGAGAGAAAAGC
Downstream 100 bases:
>100_bases TCTTCTGATGATAACAAAGAGCCTATGGATTTAGAGGTTGAAATAACTAGTATAATTCATGAAATAGGAGTTCCAGCTCA CATAAAAGGATATATGTATT
Product: phosphorylation-activated transcription factor
Products: protein L-glutamate+ methanol; methanol; Tapglu; methanol; Targlu; Trgglu; Tsrglu; NH3; protein-L-glutamate [C]
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKESKISVLIADDNKEFCNILNDYLLSQRDIVVTGIAKDGLEALKLIEEKQPDLVVLDIIMPHLDGLGVLERINSLGLEK TPRVIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTERIRQMFNSTISEEPTNSKPTISVVEGSKSED
Sequences:
>Translated_150_residues MKESKISVLIADDNKEFCNILNDYLLSQRDIVVTGIAKDGLEALKLIEEKQPDLVVLDIIMPHLDGLGVLERINSLGLEK TPRVIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTERIRQMFNSTISEEPTNSKPTISVVEGSKSED >Mature_150_residues MKESKISVLIADDNKEFCNILNDYLLSQRDIVVTGIAKDGLEALKLIEEKQPDLVVLDIIMPHLDGLGVLERINSLGLEK TPRVIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTERIRQMFNSTISEEPTNSKPTISVVEGSKSED
Specific function: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the ex
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=147, Percent_Identity=31.9727891156463, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1787487, Length=131, Percent_Identity=35.1145038167939, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR014879 - InterPro: IPR012052 - InterPro: IPR011991 - ProDom: PD010908 [H]
Pfam domain/function: PF00072 Response_reg; PF08769 Spo0A_C [H]
EC number: 3.1.1.61 [C]
Molecular weight: Translated: 16707; Mature: 16707
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESKISVLIADDNKEFCNILNDYLLSQRDIVVTGIAKDGLEALKLIEEKQPDLVVLDII CCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEEH MPHLDGLGVLERINSLGLEKTPRVIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTER HHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHEECCCEEEEECCCHHHHHHH IRQMFNSTISEEPTNSKPTISVVEGSKSED HHHHHHHHHCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MKESKISVLIADDNKEFCNILNDYLLSQRDIVVTGIAKDGLEALKLIEEKQPDLVVLDII CCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEEH MPHLDGLGVLERINSLGLEKTPRVIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTER HHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHEECCCEEEEECCCHHHHHHH IRQMFNSTISEEPTNSKPTISVVEGSKSED HHHHHHHHHCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein L-glutamate Omethyl ester; Tapglu-Me; H2O; Targlu-Me; Trgglu-Me; Tsrglu-Me; Tsrgln; Trggln; Targln; Tapgln; protein-L-glutamine [C]
Specific reaction: Protein L-glutamate Omethyl ester + H2O = protein L-glutamate+ methanol H2O + Tapglu-Me = methanol + Tapglu H2O + Targlu-Me = methanol + Targlu H2O + Trgglu-Me = methanol + Trgglu H2O + Tsrglu-Me = methanol + Tsrglu H2O + Tsrgln = NH3 + Tsrglu H2O + Trggl
General reaction: Hydrolysis of carboxylic ester [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7885226 [H]