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The map label for this gene is spo0A [H]

Identifier: 18310794

GI number: 18310794

Start: 2090953

End: 2091306

Strand: Reverse

Name: spo0A [H]

Synonym: CPE1812

Alternate gene names: 18310794

Gene position: 2091306-2090953 (Counterclockwise)

Preceding gene: 18310795

Following gene: 18310793

Centisome position: 68.99

GC content: 30.79

Gene sequence:

>354_bases
ATGGATTTAGAGGTTGAAATAACTAGTATAATTCATGAAATAGGAGTTCCAGCTCACATAAAAGGATATATGTATTTAAG
GGAAGCTATAACTATGGTTGTAAATGATATGGAATTATTATCAGCTATAACAAAAGAGTTATATCCTTCAATAGCAAAGA
AATATAATACTACTGCAAGTAGAGTTGAAAGAGCTATAAGACATGCTATAGAGGTTGCTTGGGGAAGAGGACAAATAGAT
GCCATAAACAAAATATTTGGACATACTATTCACAATGATAAGGGTAAACCAACAAACTCAGAGTTTATAGCTATGGTTGC
AGATAAATTAAGACTAAAGAATAAAGTTAGCTAA

Upstream 100 bases:

>100_bases
TAGCACAATATCAGAGGAACCTACAAATAGTAAACCTACAATTAGTGTAGTTGAAGGTTCAAAAAGTGAGGATTAATCTT
CTGATGATAACAAAGAGCCT

Downstream 100 bases:

>100_bases
ATTAAGGAGAAAGCACTTTTTATCAGATAATATTTTCACTGATAAAAAGTGCTTTTTTATAGAGAGGTGAGATAATTTGA
GAAAAGCGGTATATGTAGAA

Product: phosphorylation-activated transcription factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MDLEVEITSIIHEIGVPAHIKGYMYLREAITMVVNDMELLSAITKELYPSIAKKYNTTASRVERAIRHAIEVAWGRGQID
AINKIFGHTIHNDKGKPTNSEFIAMVADKLRLKNKVS

Sequences:

>Translated_117_residues
MDLEVEITSIIHEIGVPAHIKGYMYLREAITMVVNDMELLSAITKELYPSIAKKYNTTASRVERAIRHAIEVAWGRGQID
AINKIFGHTIHNDKGKPTNSEFIAMVADKLRLKNKVS
>Mature_117_residues
MDLEVEITSIIHEIGVPAHIKGYMYLREAITMVVNDMELLSAITKELYPSIAKKYNTTASRVERAIRHAIEVAWGRGQID
AINKIFGHTIHNDKGKPTNSEFIAMVADKLRLKNKVS

Specific function: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR014879
- InterPro:   IPR012052
- InterPro:   IPR011991
- ProDom:   PD010908 [H]

Pfam domain/function: PF00072 Response_reg; PF08769 Spo0A_C [H]

EC number: NA

Molecular weight: Translated: 13191; Mature: 13191

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLEVEITSIIHEIGVPAHIKGYMYLREAITMVVNDMELLSAITKELYPSIAKKYNTTAS
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RVERAIRHAIEVAWGRGQIDAINKIFGHTIHNDKGKPTNSEFIAMVADKLRLKNKVS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLEVEITSIIHEIGVPAHIKGYMYLREAITMVVNDMELLSAITKELYPSIAKKYNTTAS
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RVERAIRHAIEVAWGRGQIDAINKIFGHTIHNDKGKPTNSEFIAMVADKLRLKNKVS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7885226 [H]