| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310617
Identifier: 18310617
GI number: 18310617
Start: 1907638
End: 1908204
Strand: Reverse
Name: 18310617
Synonym: CPE1635
Alternate gene names: NA
Gene position: 1908204-1907638 (Counterclockwise)
Preceding gene: 18310618
Following gene: 18310616
Centisome position: 62.95
GC content: 27.87
Gene sequence:
>567_bases ATGAACAGTGTTATGAATTTAACAACTTTAGAACAAATAAAAGCATATTCAGATCCTTATAGGCTGAAGATAATAACTTA TCTTAGAAATAATCAAGAATCTGCTACGGTAAAGGAAATTGCTGATTTTTTTGGGGAAGTACCAGCAAAAGTTCATTACC ACATTAAAAAATTAGAAAAAGCAGGTATCTTAGAGCTTGTAAAAACAAAAGAAATAAAGGGAATAATAGCAAAATATTAT TATCTAACTGCAGAAAGCTTCAATATAGAGGGAAATCAAATAAAAAAAGAAGCTAAACAAGTTTACAAATCTCAAATATT AAATATTCTAAGTGAATATTATGATAGTTCAAAGGAACAAACTATGAAAAGAATATCTGAGAAAGTAGATACTGGTAATG CAGAGGATTCCATAGGTTTCAATTATAAGAACATATACTTAAATGAAGAAGAGTTTAAAGAAGTAAATAGACAAATGAGA GAACTGGTTAAAAAATACGAAAGAAAAGAAGAAGGGAAAATGCCTTGTCATGTATTTTCAGTTTGCTTAAAACATGAAGT AGAGTAA
Upstream 100 bases:
>100_bases TAATATAATAAAAATTTTAATAACACCTTATATATGTAAAATATCTAAAAATATGGTATAATAAGTAAATATTATACTGA AATATTAGGGGGGGCTTAAA
Downstream 100 bases:
>100_bases TTATTAAAATATGATTAAATTTCTTAATTAGTGATATAATAAGAAGTGATAAAATAATTTTAATTAAAATGTCATTAATA TGACTTATTAATCTACTAGA
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Regulatory Protein Arsr; ArsR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Arsr Family; Transcriptional Regulator ArsR Family
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNSVMNLTTLEQIKAYSDPYRLKIITYLRNNQESATVKEIADFFGEVPAKVHYHIKKLEKAGILELVKTKEIKGIIAKYY YLTAESFNIEGNQIKKEAKQVYKSQILNILSEYYDSSKEQTMKRISEKVDTGNAEDSIGFNYKNIYLNEEEFKEVNRQMR ELVKKYERKEEGKMPCHVFSVCLKHEVE
Sequences:
>Translated_188_residues MNSVMNLTTLEQIKAYSDPYRLKIITYLRNNQESATVKEIADFFGEVPAKVHYHIKKLEKAGILELVKTKEIKGIIAKYY YLTAESFNIEGNQIKKEAKQVYKSQILNILSEYYDSSKEQTMKRISEKVDTGNAEDSIGFNYKNIYLNEEEFKEVNRQMR ELVKKYERKEEGKMPCHVFSVCLKHEVE >Mature_188_residues MNSVMNLTTLEQIKAYSDPYRLKIITYLRNNQESATVKEIADFFGEVPAKVHYHIKKLEKAGILELVKTKEIKGIIAKYY YLTAESFNIEGNQIKKEAKQVYKSQILNILSEYYDSSKEQTMKRISEKVDTGNAEDSIGFNYKNIYLNEEEFKEVNRQMR ELVKKYERKEEGKMPCHVFSVCLKHEVE
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22084; Mature: 22084
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVMNLTTLEQIKAYSDPYRLKIITYLRNNQESATVKEIADFFGEVPAKVHYHIKKLEK CCCCHHHHHHHHHHHCCCCHHEEEEHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH AGILELVKTKEIKGIIAKYYYLTAESFNIEGNQIKKEAKQVYKSQILNILSEYYDSSKEQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH TMKRISEKVDTGNAEDSIGFNYKNIYLNEEEFKEVNRQMRELVKKYERKEEGKMPCHVFS HHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VCLKHEVE HHHHHCCC >Mature Secondary Structure MNSVMNLTTLEQIKAYSDPYRLKIITYLRNNQESATVKEIADFFGEVPAKVHYHIKKLEK CCCCHHHHHHHHHHHCCCCHHEEEEHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH AGILELVKTKEIKGIIAKYYYLTAESFNIEGNQIKKEAKQVYKSQILNILSEYYDSSKEQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH TMKRISEKVDTGNAEDSIGFNYKNIYLNEEEFKEVNRQMRELVKKYERKEEGKMPCHVFS HHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VCLKHEVE HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA