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The map label for this gene is yheN [H]

Identifier: 18310533

GI number: 18310533

Start: 1818549

End: 1819538

Strand: Reverse

Name: yheN [H]

Synonym: CPE1551

Alternate gene names: 18310533

Gene position: 1819538-1818549 (Counterclockwise)

Preceding gene: 18310534

Following gene: 18310532

Centisome position: 60.02

GC content: 29.19

Gene sequence:

>990_bases
GTGAGTAACAAAGTAAGAAATGGAAAACATAATAAGTATTTAAAAAGAAGAATAGCAGTTGCTGTAGCTGGTATTGTAGT
AATTGCAGGAGTAGGTTTTGGAATTAAATCACTAATTAGCAATAAAGCTAATAAGGAGGCTTTAGCATCAGCTAAGGAAG
AGGAAACTAAAAAAGAAGAGGAAAAACCAAAACCAACAGACATAATGCCAAATGGAAATATAATTTATGCTGCAGATTCT
TATGCAGTTAGTGCAGATGAAGTTGAAAAAATGCTTGAAGGAAAAGCTTCAAATAATGATAAAGAAATATTTTTAACTTT
TGATGATGGTCCAAGTGAAAATACAAGGGAAATATTAAAGATTTTAAATGAAGAAGATGTACATGCTACATTTTTTGATA
TAGGATCTGCCTTAAAGGATAATAAAGAAAATCAAGAGTTATTAAAACAAGAAATTGATCAAGGAAATGCAGTAGCTGGT
CATAGTTTTTCACATAATTATAAAACATTGTATCCAGGAAATTCAGTTGATGTAAATAAATTTATGAGCGAATTAAATGA
AACTAATGAAATAATGAAAAGTGTATTAGGAAAAAACTTTAATGCTAGAGTAATTAGAATGCCAGGTGGATATATGTCTA
GAAGATATTATAGAGATCCTAACTTAAAAGCTTTAGATGAGGCTTTTGCAAAGGATAATATAGTTAGTATAGATTGGGAT
GCAGAAACTGGTGATGCAACTGGAAGACATTATACAGTAGAGCAATATGTTGAAAACTCAGCTAAAAATATTAATACTTT
AAATCATGTAATTTTATTAATGCATGATGCAGCAGCTAAGAAAGAAACTGTACAAGCATTACCTGCAATAATTAAATTCT
ATAAAGAACATGGGTATGCATTTAAAGTAATAAAAAATACACCTGTAGGTGAAAATAATTCTTCAGATGCAACTGATAGT
TCACAAAATACTGACAATAAAACAAAGTAA

Upstream 100 bases:

>100_bases
TTAAATTTAAACAATTTGTAACAAAAATATTTTTGTAAAGTTTTATTATAAGTAATGAGAGGTTAATAATTTAATTTATA
TAGACATGGAGATGAATTTT

Downstream 100 bases:

>100_bases
AGATAAATTATTAGTAATAAACATACATTAAATTTTAAAATATTAATACTTAATTAAATATATAAGAAGGATTTAAGAAA
AGATTGTTTAATATAAAGAA

Product: endo-1,4-beta-xylanase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSNKVRNGKHNKYLKRRIAVAVAGIVVIAGVGFGIKSLISNKANKEALASAKEEETKKEEEKPKPTDIMPNGNIIYAADS
YAVSADEVEKMLEGKASNNDKEIFLTFDDGPSENTREILKILNEEDVHATFFDIGSALKDNKENQELLKQEIDQGNAVAG
HSFSHNYKTLYPGNSVDVNKFMSELNETNEIMKSVLGKNFNARVIRMPGGYMSRRYYRDPNLKALDEAFAKDNIVSIDWD
AETGDATGRHYTVEQYVENSAKNINTLNHVILLMHDAAAKKETVQALPAIIKFYKEHGYAFKVIKNTPVGENNSSDATDS
SQNTDNKTK

Sequences:

>Translated_329_residues
MSNKVRNGKHNKYLKRRIAVAVAGIVVIAGVGFGIKSLISNKANKEALASAKEEETKKEEEKPKPTDIMPNGNIIYAADS
YAVSADEVEKMLEGKASNNDKEIFLTFDDGPSENTREILKILNEEDVHATFFDIGSALKDNKENQELLKQEIDQGNAVAG
HSFSHNYKTLYPGNSVDVNKFMSELNETNEIMKSVLGKNFNARVIRMPGGYMSRRYYRDPNLKALDEAFAKDNIVSIDWD
AETGDATGRHYTVEQYVENSAKNINTLNHVILLMHDAAAKKETVQALPAIIKFYKEHGYAFKVIKNTPVGENNSSDATDS
SQNTDNKTK
>Mature_328_residues
SNKVRNGKHNKYLKRRIAVAVAGIVVIAGVGFGIKSLISNKANKEALASAKEEETKKEEEKPKPTDIMPNGNIIYAADSY
AVSADEVEKMLEGKASNNDKEIFLTFDDGPSENTREILKILNEEDVHATFFDIGSALKDNKENQELLKQEIDQGNAVAGH
SFSHNYKTLYPGNSVDVNKFMSELNETNEIMKSVLGKNFNARVIRMPGGYMSRRYYRDPNLKALDEAFAKDNIVSIDWDA
ETGDATGRHYTVEQYVENSAKNINTLNHVILLMHDAAAKKETVQALPAIIKFYKEHGYAFKVIKNTPVGENNSSDATDSS
QNTDNKTK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 36629; Mature: 36498

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKVRNGKHNKYLKRRIAVAVAGIVVIAGVGFGIKSLISNKANKEALASAKEEETKKEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EKPKPTDIMPNGNIIYAADSYAVSADEVEKMLEGKASNNDKEIFLTFDDGPSENTREILK
HCCCCCCCCCCCCEEEEECCCEECHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHH
ILNEEDVHATFFDIGSALKDNKENQELLKQEIDQGNAVAGHSFSHNYKTLYPGNSVDVNK
HHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCCCHHH
FMSELNETNEIMKSVLGKNFNARVIRMPGGYMSRRYYRDPNLKALDEAFAKDNIVSIDWD
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEECC
AETGDATGRHYTVEQYVENSAKNINTLNHVILLMHDAAAKKETVQALPAIIKFYKEHGYA
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHCCCE
FKVIKNTPVGENNSSDATDSSQNTDNKTK
EEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNKVRNGKHNKYLKRRIAVAVAGIVVIAGVGFGIKSLISNKANKEALASAKEEETKKEE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EKPKPTDIMPNGNIIYAADSYAVSADEVEKMLEGKASNNDKEIFLTFDDGPSENTREILK
HCCCCCCCCCCCCEEEEECCCEECHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHH
ILNEEDVHATFFDIGSALKDNKENQELLKQEIDQGNAVAGHSFSHNYKTLYPGNSVDVNK
HHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCCCHHH
FMSELNETNEIMKSVLGKNFNARVIRMPGGYMSRRYYRDPNLKALDEAFAKDNIVSIDWD
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEECC
AETGDATGRHYTVEQYVENSAKNINTLNHVILLMHDAAAKKETVQALPAIIKFYKEHGYA
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHCCCE
FKVIKNTPVGENNSSDATDSSQNTDNKTK
EEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]