| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310532
Identifier: 18310532
GI number: 18310532
Start: 1817277
End: 1818338
Strand: Reverse
Name: 18310532
Synonym: CPE1550
Alternate gene names: NA
Gene position: 1818338-1817277 (Counterclockwise)
Preceding gene: 18310533
Following gene: 18310530
Centisome position: 59.98
GC content: 29.57
Gene sequence:
>1062_bases ATGAAAAATGTAGTTTATTATTATGGAGCAGGAAACACAGCAAAAGGATTTAGACCACTTTATAATTCTATATTTCAAGG AGTCAAGAAAATTTATTCACTAAATGGAGGTAGCAATATATTTAAAACTGCCATTATAAAGGAACTTATAGATGAATATA GTGATACTTTAAGTTTAGAAGGAATAGTTAGCACTATAGACAATAATGAAATGGAAGGGGTAATACTAAGAGAAAAAGAA ATTGCAGTAATAAATGGAACACCTCTTCATGGATTTATGAATTTAGCTATTGATAATATTGAAGTTATAGATTTAGATGT ATTTTTAGACAAAGATGAAATAGAAAAAAATGAAGAGACTATAAAATTTTTAAAGGAACAATTTAAAGAGTGTATGGAAA ATGCCCATAAAGAATACGAAAAGGCTTTGAAGATACATGATTATTGGGAAGATATTTATTTCCCTTACTTAAATATTGAA AAGGCAAATAAATTTACTGAGCATGTTATTTCTTTACTAACTGATGGTGCAGTTAAGAAAGAGTCAAAGGGTAAGTGTGT TGAAAGATATTTAGGTGGAGCAACACCAAGTGGCCCTAAGGATTCTGTTCCTAGCATAACTGAAGGGGTAAAAAGATACT TTTTAAAAGGAAGAGCTGGAACAGGAAAGTCAACTATGTTAAAGAAAATAGCTAAGGCAGTAATGGAATTAGGGTATGAT GTGGAAGTTTATAATTGTGGCTTTGATCCAGATAGTAAGGATATGGTTATAAGTAGAGAGCTAAACTTTGCAATTTTTGA TAGCACAGCTCCCCATGAATATTTCCCAAGTAGGGAAGATGATGAAATAATAGATGTTTATACAACATATATTGATGGAG ATGTTGATAAAATTCACAAAGAAGAGATTAAAAAGATTGCTTTAAATTACAAAAATCAAGTGGCAAAGGGAACGGCTTTT TTATTAAAAGGAGAAGAAGTAAAAAATAAGCTAGATGATATTTATAATAATGCATTTAATCATAAGGAAGCAAAAGGTGT TTTAGAATTTTTATTTGAATAG
Upstream 100 bases:
>100_bases TTTATAAAAATAAGATCAGCTCTCTTCTTTGCTGTAACTTATTTACAAATTTAAAAATATAATAAGTTAAGAGCTATATA TTGATATTAAGGAGAAGAAA
Downstream 100 bases:
>100_bases ACTAAAAAAGTGCTCTGCAAAAAAGCAGAGCACTTTTAAATTAAGCATATTATTTTTCGTCTAATAATCTTTGGATTATG TTAGTAGCGTCCATATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLEGIVSTIDNNEMEGVILREKE IAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEETIKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIE KANKFTEHVISLLTDGAVKKESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHKEEIKKIALNYKNQVAKGTAF LLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE
Sequences:
>Translated_353_residues MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLEGIVSTIDNNEMEGVILREKE IAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEETIKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIE KANKFTEHVISLLTDGAVKKESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHKEEIKKIALNYKNQVAKGTAF LLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE >Mature_353_residues MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLEGIVSTIDNNEMEGVILREKE IAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEETIKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIE KANKFTEHVISLLTDGAVKKESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHKEEIKKIALNYKNQVAKGTAF LLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40146; Mature: 40146
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLE CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHH GIVSTIDNNEMEGVILREKEIAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEET HHHHHHCCCCCCEEEEECCEEEEEECCCCHHHHHHEECCEEEEEEEEEECHHHHHCCHHH IKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIEKANKFTEHVISLLTDGAVKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCCC ESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHK EEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCEEHHHHHHCCCHHHHHH EEIKKIALNYKNQVAKGTAFLLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE HHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLE CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHH GIVSTIDNNEMEGVILREKEIAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEET HHHHHHCCCCCCEEEEECCEEEEEECCCCHHHHHHEECCEEEEEEEEEECHHHHHCCHHH IKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIEKANKFTEHVISLLTDGAVKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCCC ESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHK EEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCEEHHHHHHCCCHHHHHH EEIKKIALNYKNQVAKGTAFLLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE HHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA