Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310532

Identifier: 18310532

GI number: 18310532

Start: 1817277

End: 1818338

Strand: Reverse

Name: 18310532

Synonym: CPE1550

Alternate gene names: NA

Gene position: 1818338-1817277 (Counterclockwise)

Preceding gene: 18310533

Following gene: 18310530

Centisome position: 59.98

GC content: 29.57

Gene sequence:

>1062_bases
ATGAAAAATGTAGTTTATTATTATGGAGCAGGAAACACAGCAAAAGGATTTAGACCACTTTATAATTCTATATTTCAAGG
AGTCAAGAAAATTTATTCACTAAATGGAGGTAGCAATATATTTAAAACTGCCATTATAAAGGAACTTATAGATGAATATA
GTGATACTTTAAGTTTAGAAGGAATAGTTAGCACTATAGACAATAATGAAATGGAAGGGGTAATACTAAGAGAAAAAGAA
ATTGCAGTAATAAATGGAACACCTCTTCATGGATTTATGAATTTAGCTATTGATAATATTGAAGTTATAGATTTAGATGT
ATTTTTAGACAAAGATGAAATAGAAAAAAATGAAGAGACTATAAAATTTTTAAAGGAACAATTTAAAGAGTGTATGGAAA
ATGCCCATAAAGAATACGAAAAGGCTTTGAAGATACATGATTATTGGGAAGATATTTATTTCCCTTACTTAAATATTGAA
AAGGCAAATAAATTTACTGAGCATGTTATTTCTTTACTAACTGATGGTGCAGTTAAGAAAGAGTCAAAGGGTAAGTGTGT
TGAAAGATATTTAGGTGGAGCAACACCAAGTGGCCCTAAGGATTCTGTTCCTAGCATAACTGAAGGGGTAAAAAGATACT
TTTTAAAAGGAAGAGCTGGAACAGGAAAGTCAACTATGTTAAAGAAAATAGCTAAGGCAGTAATGGAATTAGGGTATGAT
GTGGAAGTTTATAATTGTGGCTTTGATCCAGATAGTAAGGATATGGTTATAAGTAGAGAGCTAAACTTTGCAATTTTTGA
TAGCACAGCTCCCCATGAATATTTCCCAAGTAGGGAAGATGATGAAATAATAGATGTTTATACAACATATATTGATGGAG
ATGTTGATAAAATTCACAAAGAAGAGATTAAAAAGATTGCTTTAAATTACAAAAATCAAGTGGCAAAGGGAACGGCTTTT
TTATTAAAAGGAGAAGAAGTAAAAAATAAGCTAGATGATATTTATAATAATGCATTTAATCATAAGGAAGCAAAAGGTGT
TTTAGAATTTTTATTTGAATAG

Upstream 100 bases:

>100_bases
TTTATAAAAATAAGATCAGCTCTCTTCTTTGCTGTAACTTATTTACAAATTTAAAAATATAATAAGTTAAGAGCTATATA
TTGATATTAAGGAGAAGAAA

Downstream 100 bases:

>100_bases
ACTAAAAAAGTGCTCTGCAAAAAAGCAGAGCACTTTTAAATTAAGCATATTATTTTTCGTCTAATAATCTTTGGATTATG
TTAGTAGCGTCCATATATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLEGIVSTIDNNEMEGVILREKE
IAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEETIKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIE
KANKFTEHVISLLTDGAVKKESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD
VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHKEEIKKIALNYKNQVAKGTAF
LLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE

Sequences:

>Translated_353_residues
MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLEGIVSTIDNNEMEGVILREKE
IAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEETIKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIE
KANKFTEHVISLLTDGAVKKESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD
VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHKEEIKKIALNYKNQVAKGTAF
LLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE
>Mature_353_residues
MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLEGIVSTIDNNEMEGVILREKE
IAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEETIKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIE
KANKFTEHVISLLTDGAVKKESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD
VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHKEEIKKIALNYKNQVAKGTAF
LLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40146; Mature: 40146

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLE
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHH
GIVSTIDNNEMEGVILREKEIAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEET
HHHHHHCCCCCCEEEEECCEEEEEECCCCHHHHHHEECCEEEEEEEEEECHHHHHCCHHH
IKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIEKANKFTEHVISLLTDGAVKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCCC
ESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD
CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHK
EEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCEEHHHHHHCCCHHHHHH
EEIKKIALNYKNQVAKGTAFLLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE
HHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKNVVYYYGAGNTAKGFRPLYNSIFQGVKKIYSLNGGSNIFKTAIIKELIDEYSDTLSLE
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHH
GIVSTIDNNEMEGVILREKEIAVINGTPLHGFMNLAIDNIEVIDLDVFLDKDEIEKNEET
HHHHHHCCCCCCEEEEECCEEEEEECCCCHHHHHHEECCEEEEEEEEEECHHHHHCCHHH
IKFLKEQFKECMENAHKEYEKALKIHDYWEDIYFPYLNIEKANKFTEHVISLLTDGAVKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCCC
ESKGKCVERYLGGATPSGPKDSVPSITEGVKRYFLKGRAGTGKSTMLKKIAKAVMELGYD
CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
VEVYNCGFDPDSKDMVISRELNFAIFDSTAPHEYFPSREDDEIIDVYTTYIDGDVDKIHK
EEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCEEHHHHHHCCCHHHHHH
EEIKKIALNYKNQVAKGTAFLLKGEEVKNKLDDIYNNAFNHKEAKGVLEFLFE
HHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA