| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is sacA [H]
Identifier: 18310514
GI number: 18310514
Start: 1793893
End: 1795356
Strand: Reverse
Name: sacA [H]
Synonym: CPE1532
Alternate gene names: 18310514
Gene position: 1795356-1793893 (Counterclockwise)
Preceding gene: 18310515
Following gene: 18310513
Centisome position: 59.22
GC content: 27.87
Gene sequence:
>1464_bases ATGGAGTTTTTAAATGATGAAGATATAAACAAAAAATCAAAAGAATATTATAATAAAACTAAAGATATATGGAGAGATAA TTTTCATTTTGAGCCTCCCTTTGGGCTTATAAATGATCCAAATGGATTAAGTTATTATAAAGGAGAATATTACATATTTT TTCAGTGGAACCCATATGGCTGTGAGCACAAGAATAAACATTGGGGAATTGTAAAAACAAAGAACTTTAAAGATTTTTCA ATACCTAAAATTGCTTTAACTCCAAAAGAATATTTTGATAAGGATGGATGTTATTCAGGGGGATCTATTGTTAAGGATGG TAACTTACAAGTGTTTTATACTGGGAATGTTAAAGGGGAGAAAGGAGAGAGAATATCTTATCAATGCAAGGGGATTCTTG AAGAAAATGGACAATTGAAAAAATTAGGCCCAGTTATTTCTACATTACCCAAAGGATATACAGCTCATTTTAGAGATCCA TATATTTGGGAAAATAATGGTTATTATTATATGATTCTTGGAATACAGACTGAAAAGCTAAAGGGTAGATGCGTAATATA TAAATCAAATGATCTAGATAATTGGAAGTTTTATGGGGAACTAAAAACGTCTTATGAGGATTTTGGATTTATGTGGGAAT GTCCATCTTTTTTTAAAATTGATAATAAGGATATTTTAATATTTTCTCCTCAAGGAATTAAAGAAGAAGAGTTTAGATAT CAAAACATATATCAATCGGGATACTTAATAGGAAATTTAAATTATGATACTTTAGAATTTAAAAATAATAATGAGTTCAA GGAATTAGATATGGGCTTTGATTTTTATGCTCCTCAAGTATTTAAGGACGAAAAAGGAAGAAATATATTAATTGGATGGA TGGGGCTTCCTGAAAAAGAAGAGTTTCATTGTAGTAGGGAGAATGGATGGATATTTTCTTTAACCATGCCTAGAGAATTA ACCTTAAAGAATGGAGTTTTACATCAAAATCCTATAGAAGAGATGAGAAAGCTTAGGGGAGATAAAATTGTAAGCTTAAA AAATATACTCATTGAAGATTTAAATTTTAATGAAGTAAAAGAAAATAGTTATGAGCTTAAACTAGATATAGAAAGACGGG AAGCATCAAAGATTGAAATTAATTTTATGGAGAGTAATGAGGAACATACCTCTTTAATTTATGATTTTAAAAAAGAAATT TGTATAATAGATAGAAATTCAATGATTAATGGAGAAAAGGGTATAAGGAAGTTTAAGTTACATTCTAATGGGAATTTAAA AATTAATATGTTTGTGGATAAATCATCAGTAGAAATATATTTTCAAGATGGAATTGAAGTAGCATCATTAAAGCTTTACC CTAAAAAAGATAGCTTTAATTTAAGTTTAAAATCAGAAGAGGGTAAAATTAAAATAAATTCCTTGAGTATATGGGAGATG AATGAGGTGAATTATAATGAATAA
Upstream 100 bases:
>100_bases AAATACTTGTGAAATTCCTTTAGAACTTATGGTAAGAGAAAGTGTTAAAAGTTTAAAGTAGGGTTTGCTTCACCGAATAA TTTAAAGAAAGGTGAAGTAA
Downstream 100 bases:
>100_bases AGTATTTTGTATAGGAGAGTTATTAATAGATTTTATAGGAAAAGATATAGGAAAAGGTCTTAAAAATGGAGTAAACTTTG AGAAAAAGGCTGGTGGAGCT
Product: sucrose-6-P hydrolase
Products: NA
Alternate protein names: Sucrase; Invertase [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MEFLNDEDINKKSKEYYNKTKDIWRDNFHFEPPFGLINDPNGLSYYKGEYYIFFQWNPYGCEHKNKHWGIVKTKNFKDFS IPKIALTPKEYFDKDGCYSGGSIVKDGNLQVFYTGNVKGEKGERISYQCKGILEENGQLKKLGPVISTLPKGYTAHFRDP YIWENNGYYYMILGIQTEKLKGRCVIYKSNDLDNWKFYGELKTSYEDFGFMWECPSFFKIDNKDILIFSPQGIKEEEFRY QNIYQSGYLIGNLNYDTLEFKNNNEFKELDMGFDFYAPQVFKDEKGRNILIGWMGLPEKEEFHCSRENGWIFSLTMPREL TLKNGVLHQNPIEEMRKLRGDKIVSLKNILIEDLNFNEVKENSYELKLDIERREASKIEINFMESNEEHTSLIYDFKKEI CIIDRNSMINGEKGIRKFKLHSNGNLKINMFVDKSSVEIYFQDGIEVASLKLYPKKDSFNLSLKSEEGKIKINSLSIWEM NEVNYNE
Sequences:
>Translated_487_residues MEFLNDEDINKKSKEYYNKTKDIWRDNFHFEPPFGLINDPNGLSYYKGEYYIFFQWNPYGCEHKNKHWGIVKTKNFKDFS IPKIALTPKEYFDKDGCYSGGSIVKDGNLQVFYTGNVKGEKGERISYQCKGILEENGQLKKLGPVISTLPKGYTAHFRDP YIWENNGYYYMILGIQTEKLKGRCVIYKSNDLDNWKFYGELKTSYEDFGFMWECPSFFKIDNKDILIFSPQGIKEEEFRY QNIYQSGYLIGNLNYDTLEFKNNNEFKELDMGFDFYAPQVFKDEKGRNILIGWMGLPEKEEFHCSRENGWIFSLTMPREL TLKNGVLHQNPIEEMRKLRGDKIVSLKNILIEDLNFNEVKENSYELKLDIERREASKIEINFMESNEEHTSLIYDFKKEI CIIDRNSMINGEKGIRKFKLHSNGNLKINMFVDKSSVEIYFQDGIEVASLKLYPKKDSFNLSLKSEEGKIKINSLSIWEM NEVNYNE >Mature_487_residues MEFLNDEDINKKSKEYYNKTKDIWRDNFHFEPPFGLINDPNGLSYYKGEYYIFFQWNPYGCEHKNKHWGIVKTKNFKDFS IPKIALTPKEYFDKDGCYSGGSIVKDGNLQVFYTGNVKGEKGERISYQCKGILEENGQLKKLGPVISTLPKGYTAHFRDP YIWENNGYYYMILGIQTEKLKGRCVIYKSNDLDNWKFYGELKTSYEDFGFMWECPSFFKIDNKDILIFSPQGIKEEEFRY QNIYQSGYLIGNLNYDTLEFKNNNEFKELDMGFDFYAPQVFKDEKGRNILIGWMGLPEKEEFHCSRENGWIFSLTMPREL TLKNGVLHQNPIEEMRKLRGDKIVSLKNILIEDLNFNEVKENSYELKLDIERREASKIEINFMESNEEHTSLIYDFKKEI CIIDRNSMINGEKGIRKFKLHSNGNLKINMFVDKSSVEIYFQDGIEVASLKLYPKKDSFNLSLKSEEGKIKINSLSIWEM NEVNYNE
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=513, Percent_Identity=22.6120857699805, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR006232 [H]
Pfam domain/function: PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.26 [H]
Molecular weight: Translated: 57512; Mature: 57512
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00609 GLYCOSYL_HYDROL_F32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLNDEDINKKSKEYYNKTKDIWRDNFHFEPPFGLINDPNGLSYYKGEYYIFFQWNPYG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCC CEHKNKHWGIVKTKNFKDFSIPKIALTPKEYFDKDGCYSGGSIVKDGNLQVFYTGNVKGE CCCCCCEECEEEECCCCCCCCCEEEECCHHHCCCCCCCCCCCEEECCCEEEEEECCCCCC KGERISYQCKGILEENGQLKKLGPVISTLPKGYTAHFRDPYIWENNGYYYMILGIQTEKL CCCEEEEEEEEEECCCCCEEHHCHHHHHCCCCCEECCCCCEEEECCCEEEEEEEEEECCC KGRCVIYKSNDLDNWKFYGELKTSYEDFGFMWECPSFFKIDNKDILIFSPQGIKEEEFRY CCEEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCEEECCCCEEEECCCCCCHHHHHH QNIYQSGYLIGNLNYDTLEFKNNNEFKELDMGFDFYAPQVFKDEKGRNILIGWMGLPEKE HHHHHCCEEEEECCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCH EFHCSRENGWIFSLTMPRELTLKNGVLHQNPIEEMRKLRGDKIVSLKNILIEDLNFNEVK HCEEECCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCEEEEEEHHEEECCCCCCCC ENSYELKLDIERREASKIEINFMESNEEHTSLIYDFKKEICIIDRNSMINGEKGIRKFKL CCCEEEEEEEECCCCCEEEEEEEECCCCHHHEEEECCCCEEEEECCCCCCCCCCCEEEEE HSNGNLKINMFVDKSSVEIYFQDGIEVASLKLYPKKDSFNLSLKSEEGKIKINSLSIWEM ECCCCEEEEEEEECCCEEEEEECCCEEEEEEEEECCCCEEEEEECCCCEEEEEEEEEEEE NEVNYNE CCCCCCC >Mature Secondary Structure MEFLNDEDINKKSKEYYNKTKDIWRDNFHFEPPFGLINDPNGLSYYKGEYYIFFQWNPYG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCC CEHKNKHWGIVKTKNFKDFSIPKIALTPKEYFDKDGCYSGGSIVKDGNLQVFYTGNVKGE CCCCCCEECEEEECCCCCCCCCEEEECCHHHCCCCCCCCCCCEEECCCEEEEEECCCCCC KGERISYQCKGILEENGQLKKLGPVISTLPKGYTAHFRDPYIWENNGYYYMILGIQTEKL CCCEEEEEEEEEECCCCCEEHHCHHHHHCCCCCEECCCCCEEEECCCEEEEEEEEEECCC KGRCVIYKSNDLDNWKFYGELKTSYEDFGFMWECPSFFKIDNKDILIFSPQGIKEEEFRY CCEEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCEEECCCCEEEECCCCCCHHHHHH QNIYQSGYLIGNLNYDTLEFKNNNEFKELDMGFDFYAPQVFKDEKGRNILIGWMGLPEKE HHHHHCCEEEEECCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCH EFHCSRENGWIFSLTMPRELTLKNGVLHQNPIEEMRKLRGDKIVSLKNILIEDLNFNEVK HCEEECCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCEEEEEEHHEEECCCCCCCC ENSYELKLDIERREASKIEINFMESNEEHTSLIYDFKKEICIIDRNSMINGEKGIRKFKL CCCEEEEEEEECCCCCEEEEEEEECCCCHHHEEEECCCCEEEEECCCCCCCCCCCEEEEE HSNGNLKINMFVDKSSVEIYFQDGIEVASLKLYPKKDSFNLSLKSEEGKIKINSLSIWEM ECCCCEEEEEEEECCCEEEEEECCCEEEEEEEEECCCCEEEEEECCCCEEEEEEEEEEEE NEVNYNE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3100393; 7934828; 9384377; 3122206 [H]