| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is ydjE [H]
Identifier: 18310513
GI number: 18310513
Start: 1792953
End: 1793900
Strand: Reverse
Name: ydjE [H]
Synonym: CPE1531
Alternate gene names: 18310513
Gene position: 1793900-1792953 (Counterclockwise)
Preceding gene: 18310514
Following gene: 18310512
Centisome position: 59.18
GC content: 30.38
Gene sequence:
>948_bases ATGAATAAAGTATTTTGTATAGGAGAGTTATTAATAGATTTTATAGGAAAAGATATAGGAAAAGGTCTTAAAAATGGAGT AAACTTTGAGAAAAAGGCTGGTGGAGCTCCAGCAAATGTTGGAGCAGCAGTTTGTAAGCTTGGAGGAGAATCTTATTTTT TAGGACAAGTTGGTAATGACTCTTTTGGAGAATTTCTAGTTGATATGCTAAAAAATATAGGTATAAATACTGAAATGACT AAAATGGATGGATATACAACCTTAGCATTTGTAGCTATTGATGAAAAGGGAGAAAGAGATTTTGAGTTTCATAGAGGTAG TGATGGAGAATACTCATTTAATAATATTGATTTAAGTAAAATAGAAAAGGATGATATAATTCATTTTGGTTCAGCTACGG GATTTTTAAAAGGTGAACTTAAGAACACTTATTTTAAGCTTTTAGAGATTGGACGTAAAAATGGAAACTTTATATCTTTT GATCCAAACTATAGAGATATGCTTATTAAAGAAGAAGGAATTGAAGAGTTTAAAGAAGACTGTAAGAAATTTATAAGCTC TTGTGATTTTTTAAAGCTTAGTGATGAGGAGATAAAGCTTTTAACTGAGGAAGAAGATTTAGAAAGAGGAGTTGAAAAAC TTCATTCTTTAGGAGCAAAAATAATAGCTGTTACACTAGGAGGAAAAGGAACTCTTTTAAGTAATGGCATTCATTCAGAG ATAGTTCCATCAATAAAAATTAATCAAGTAGATTCAACTGGGGCAGGAGATGCTTTCGTTGGGGCTGTTCTTAAGAAAGT AAGCGAATTAAAAGATAAGAAGAATTTAGATTTAAATTCATGGAGAGAAATTATAAGTTATGGAAATAAGGTTGGAGCAT TGACATGCACAAATTATGGTGCTATTGATGCTATTCCAAATGAAGAAGATTTAATGAAATATATATAG
Upstream 100 bases:
>100_bases TACCCTAAAAAAGATAGCTTTAATTTAAGTTTAAAATCAGAAGAGGGTAAAATTAAAATAAATTCCTTGAGTATATGGGA GATGAATGAGGTGAATTATA
Downstream 100 bases:
>100_bases TTTATTTGAAAGCATATGAGAATTTTTAGGAACCTATTAAAATCCTTTAGTTCTCATATGTTTTTTTATTTTAGTATATT TTAGATTAGAGTTTTATCCT
Product: fructokinase
Products: ADP; D-fructose 6-phosphate
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MNKVFCIGELLIDFIGKDIGKGLKNGVNFEKKAGGAPANVGAAVCKLGGESYFLGQVGNDSFGEFLVDMLKNIGINTEMT KMDGYTTLAFVAIDEKGERDFEFHRGSDGEYSFNNIDLSKIEKDDIIHFGSATGFLKGELKNTYFKLLEIGRKNGNFISF DPNYRDMLIKEEGIEEFKEDCKKFISSCDFLKLSDEEIKLLTEEEDLERGVEKLHSLGAKIIAVTLGGKGTLLSNGIHSE IVPSIKINQVDSTGAGDAFVGAVLKKVSELKDKKNLDLNSWREIISYGNKVGALTCTNYGAIDAIPNEEDLMKYI
Sequences:
>Translated_315_residues MNKVFCIGELLIDFIGKDIGKGLKNGVNFEKKAGGAPANVGAAVCKLGGESYFLGQVGNDSFGEFLVDMLKNIGINTEMT KMDGYTTLAFVAIDEKGERDFEFHRGSDGEYSFNNIDLSKIEKDDIIHFGSATGFLKGELKNTYFKLLEIGRKNGNFISF DPNYRDMLIKEEGIEEFKEDCKKFISSCDFLKLSDEEIKLLTEEEDLERGVEKLHSLGAKIIAVTLGGKGTLLSNGIHSE IVPSIKINQVDSTGAGDAFVGAVLKKVSELKDKKNLDLNSWREIISYGNKVGALTCTNYGAIDAIPNEEDLMKYI >Mature_315_residues MNKVFCIGELLIDFIGKDIGKGLKNGVNFEKKAGGAPANVGAAVCKLGGESYFLGQVGNDSFGEFLVDMLKNIGINTEMT KMDGYTTLAFVAIDEKGERDFEFHRGSDGEYSFNNIDLSKIEKDDIIHFGSATGFLKGELKNTYFKLLEIGRKNGNFISF DPNYRDMLIKEEGIEEFKEDCKKFISSCDFLKLSDEEIKLLTEEEDLERGVEKLHSLGAKIIAVTLGGKGTLLSNGIHSE IVPSIKINQVDSTGAGDAFVGAVLKKVSELKDKKNLDLNSWREIISYGNKVGALTCTNYGAIDAIPNEEDLMKYI
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87081971, Length=321, Percent_Identity=23.6760124610592, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87082281, Length=283, Percent_Identity=24.0282685512367, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790193, Length=298, Percent_Identity=22.4832214765101, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: 2.7.1.4
Molecular weight: Translated: 34665; Mature: 34665
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVFCIGELLIDFIGKDIGKGLKNGVNFEKKAGGAPANVGAAVCKLGGESYFLGQVGND CCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCEEEEEECCCC SFGEFLVDMLKNIGINTEMTKMDGYTTLAFVAIDEKGERDFEFHRGSDGEYSFNNIDLSK HHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCCCCCEECCCCCCEEECCCCHHH IEKDDIIHFGSATGFLKGELKNTYFKLLEIGRKNGNFISFDPNYRDMLIKEEGIEEFKED CCCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHH CKKFISSCDFLKLSDEEIKLLTEEEDLERGVEKLHSLGAKIIAVTLGGKGTLLSNGIHSE HHHHHHCCCCEEECCCHHEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHH IVPSIKINQVDSTGAGDAFVGAVLKKVSELKDKKNLDLNSWREIISYGNKVGALTCTNYG CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCC AIDAIPNEEDLMKYI CCCCCCCHHHHHHCC >Mature Secondary Structure MNKVFCIGELLIDFIGKDIGKGLKNGVNFEKKAGGAPANVGAAVCKLGGESYFLGQVGND CCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCEEEEEECCCC SFGEFLVDMLKNIGINTEMTKMDGYTTLAFVAIDEKGERDFEFHRGSDGEYSFNNIDLSK HHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCCCCCEECCCCCCEEECCCCHHH IEKDDIIHFGSATGFLKGELKNTYFKLLEIGRKNGNFISFDPNYRDMLIKEEGIEEFKED CCCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHH CKKFISSCDFLKLSDEEIKLLTEEEDLERGVEKLHSLGAKIIAVTLGGKGTLLSNGIHSE HHHHHHCCCCEEECCCHHEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHH IVPSIKINQVDSTGAGDAFVGAVLKKVSELKDKKNLDLNSWREIISYGNKVGALTCTNYG CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCC AIDAIPNEEDLMKYI CCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-fructose
Specific reaction: ATP + D-fructose = ADP + D-fructose 6-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]