| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is sas2
Identifier: 18310405
GI number: 18310405
Start: 1677991
End: 1678173
Strand: Direct
Name: sas2
Synonym: CPE1423
Alternate gene names: 18310405
Gene position: 1677991-1678173 (Clockwise)
Preceding gene: 18310404
Following gene: 18310411
Centisome position: 55.35
GC content: 36.07
Gene sequence:
>183_bases ATGTCACAACATTTAGTTCCAGAAGCAAAAAACGGTTTATCAAAATTCAAAAATGAGGTAGCAAATGAAATGGGAGTACC ATTCTCAGACTACAACGGAGACCTTAGCTCAAGACAATGCGGAAGCGTTGGTGGAGAAATGGTTAAAAGAATGGTAGAAA AATACGAACAATCAATGAAATAA
Upstream 100 bases:
>100_bases ATAGATTATTAAATCCAATTCTGCACATCATAATATTGAAAGGAAAAGAAAAACTTAACCTTTCAAAAAAATCTTATTAA ACTTAAAGGAGGAATTCAAA
Downstream 100 bases:
>100_bases TAACAAAAAATAAGAGGTAAGAATTTTCTTACCTCTTATTTTTTACTTTAAGAAACTTTTTTAAGCATAAAGTTTCTCCA ATTTCCATCCTGTATTAATA
Product: small acid-soluble spore protein C2
Products: NA
Alternate protein names: ASSP; SASP; SSP-3
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MSQHLVPEAKNGLSKFKNEVANEMGVPFSDYNGDLSSRQCGSVGGEMVKRMVEKYEQSMK
Sequences:
>Translated_60_residues MSQHLVPEAKNGLSKFKNEVANEMGVPFSDYNGDLSSRQCGSVGGEMVKRMVEKYEQSMK >Mature_59_residues SQHLVPEAKNGLSKFKNEVANEMGVPFSDYNGDLSSRQCGSVGGEMVKRMVEKYEQSMK
Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta-type SASP family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAS2_CLOPE (P21887)
Other databases:
- EMBL: M57434 - EMBL: X59482 - EMBL: BA000016 - PIR: C54537 - RefSeq: NP_562339.1 - ProteinModelPortal: P21887 - SMR: P21887 - GeneID: 989733 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE1423 - NMPDR: fig|195102.1.peg.1486 - HOGENOM: HBG727578 - OMA: MANSLVP - ProtClustDB: CLSK811053 - BioCyc: CPER195102:CPE1423-MONOMER - InterPro: IPR001448 - InterPro: IPR018126
Pfam domain/function: PF00269 SASP
EC number: NA
Molecular weight: Translated: 6685; Mature: 6553
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00304 SASP_1; PS00684 SASP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHLVPEAKNGLSKFKNEVANEMGVPFSDYNGDLSSRQCGSVGGEMVKRMVEKYEQSMK CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQHLVPEAKNGLSKFKNEVANEMGVPFSDYNGDLSSRQCGSVGGEMVKRMVEKYEQSMK CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2401406; 2037223; 11792842