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The map label for this gene is 18310402

Identifier: 18310402

GI number: 18310402

Start: 1674837

End: 1675493

Strand: Reverse

Name: 18310402

Synonym: CPE1420

Alternate gene names: NA

Gene position: 1675493-1674837 (Counterclockwise)

Preceding gene: 18310406

Following gene: 18310401

Centisome position: 55.27

GC content: 28.16

Gene sequence:

>657_bases
ATGAAGGATAAAGAATTATTTGAAATTTTAGAAAAGCATATTTTAGAGGATAAGAATCCATCAGAATTTTTAAATTATTT
AAAGGAAAAGAAGCTTTTAGAAGGCTCTTTTTTAGAAATATTAAGGGATTTAGAAGAGGTTAAGCAGGAGAAAAAATACC
ATCCAGAAGGAAATGTATGGATTCATACAATGCAAGTTTTAGATGAAGCAGCCAGTTTAAGAGAGCTTGCTAATAATAAA
AGAGAATTTATGTGGGCAGCTTTACTTCATGACATTGGAAAGAGAGATACTACTAAGATGAGAAAGGGAAGATGGACTGC
TTATGACCATGATAGGGTAGGAGCGAAACTTTCAAAAGAAATATTAGAAGAGGCTACTGATAATGAGAAATTTATAAGTG
AAGTAAGCAGTTTAGTTAGATATCATATGTCTTATCTTTATATAGATAAAAATTTACCCTTTGTAAAAGCAGAAGATATG
GTTAAAAATTCAGATCTTCATGATATAGCTTTATTGACTTATTGTGATAGAGTTGGAAGAGGGAAAAAGACTTTAGAAGA
TAAGAAAAAAATATTAGATTCAATAAATAATTTTATAGTTAAAGTCAATGAGAAAACTAATGGAAACTATGAAAAATTAT
ATATTTTAGGAAAATAA

Upstream 100 bases:

>100_bases
TGACAATTAATAAAAGAATGAATTTAAATTATTGGTGGTAAAATATAATTAAGTTAAATTAAAAATAAATTTTAATTAGT
GAAAGTTTAGGAGTTTATAT

Downstream 100 bases:

>100_bases
GTAATTGATTTTTGTAATGATTACTTATATAATGTCTATTATAAATTAAAATTCAATATGTTCGGATGAAGGTAATGGGA
GAGTGATATTTTAAATATCC

Product: poly A polymerase

Products: NA

Alternate protein names: Polynucleotide Adenylyltransferase Region; HD Superfamily Hydrolase; Poly A Polymerase; Metal Dependent Phophohydrolase; HD Domain-Containing Protein; PolyA Polymerase-Like Protein; HD Domain Protein; tRNA Nucleotidyltransferase/Poly(A) Polymerase; PolyA Polymerase Related Protein

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKDKELFEILEKHILEDKNPSEFLNYLKEKKLLEGSFLEILRDLEEVKQEKKYHPEGNVWIHTMQVLDEAASLRELANNK
REFMWAALLHDIGKRDTTKMRKGRWTAYDHDRVGAKLSKEILEEATDNEKFISEVSSLVRYHMSYLYIDKNLPFVKAEDM
VKNSDLHDIALLTYCDRVGRGKKTLEDKKKILDSINNFIVKVNEKTNGNYEKLYILGK

Sequences:

>Translated_218_residues
MKDKELFEILEKHILEDKNPSEFLNYLKEKKLLEGSFLEILRDLEEVKQEKKYHPEGNVWIHTMQVLDEAASLRELANNK
REFMWAALLHDIGKRDTTKMRKGRWTAYDHDRVGAKLSKEILEEATDNEKFISEVSSLVRYHMSYLYIDKNLPFVKAEDM
VKNSDLHDIALLTYCDRVGRGKKTLEDKKKILDSINNFIVKVNEKTNGNYEKLYILGK
>Mature_218_residues
MKDKELFEILEKHILEDKNPSEFLNYLKEKKLLEGSFLEILRDLEEVKQEKKYHPEGNVWIHTMQVLDEAASLRELANNK
REFMWAALLHDIGKRDTTKMRKGRWTAYDHDRVGAKLSKEILEEATDNEKFISEVSSLVRYHMSYLYIDKNLPFVKAEDM
VKNSDLHDIALLTYCDRVGRGKKTLEDKKKILDSINNFIVKVNEKTNGNYEKLYILGK

Specific function: Unknown

COG id: COG0617

COG function: function code J; tRNA nucleotidyltransferase/poly(A) polymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25697; Mature: 25697

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKELFEILEKHILEDKNPSEFLNYLKEKKLLEGSFLEILRDLEEVKQEKKYHPEGNVW
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEE
IHTMQVLDEAASLRELANNKREFMWAALLHDIGKRDTTKMRKGRWTAYDHDRVGAKLSKE
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHH
ILEEATDNEKFISEVSSLVRYHMSYLYIDKNLPFVKAEDMVKNSDLHDIALLTYCDRVGR
HHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCC
GKKTLEDKKKILDSINNFIVKVNEKTNGNYEKLYILGK
CHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MKDKELFEILEKHILEDKNPSEFLNYLKEKKLLEGSFLEILRDLEEVKQEKKYHPEGNVW
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEE
IHTMQVLDEAASLRELANNKREFMWAALLHDIGKRDTTKMRKGRWTAYDHDRVGAKLSKE
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHH
ILEEATDNEKFISEVSSLVRYHMSYLYIDKNLPFVKAEDMVKNSDLHDIALLTYCDRVGR
HHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCC
GKKTLEDKKKILDSINNFIVKVNEKTNGNYEKLYILGK
CHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA