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The map label for this gene is yaaJ [C]

Identifier: 18310401

GI number: 18310401

Start: 1673142

End: 1674530

Strand: Reverse

Name: yaaJ [C]

Synonym: CPE1419

Alternate gene names: 18310401

Gene position: 1674530-1673142 (Counterclockwise)

Preceding gene: 18310402

Following gene: 18310399

Centisome position: 55.24

GC content: 33.26

Gene sequence:

>1389_bases
ATGGAAAACTTATTAAATCAAATCGACAATTTAGTATGGGGAGTGCCACTTCTTATGCTGCTTGTAGGAACAGGAATATA
CCTGACTATAAGACTAAAATTATTACAAATTTTAAAATTACCATTAGCCTTAAAGTATGTATTTAAAAAAGATGAGGAAA
CTTCTTGTGAGGATGCAGAAGGAGATGTTTCAAGTTTTGGAGCCTTATGTACAGCTCTTTCAGCTACTATAGGTACTGGA
AACATAGTTGGGGTTGCCACTGCTATAAAGGCAGGGGGACCAGGAGCATTATTTTGGATGTGGGTAGCTGCTTTCTTTGG
AATGGCAACTAAATATGCAGAAGGTGTACTTGCTATAAAGTATAGGGTTGTAGATGAAAATGGTCAAATGGCTGGTGGAC
CAATGTACTATATAAAAAATGGACTTGGTTTAAATTGGCTAGCTAATATTTTTGCTTTCTTTGGAATTGGTGTGGCTTTA
TTAGGAATAGGAACTTTTGGACAAGTTAAGTCCATAACTGATGCAGCAAGTATTACATTTAATGTTCCTACAATTATTAC
AGCAGGAGTAGTAACTTTATTAGTGGCTTTAGTAATTTTAGGTGGAATAAAAAGAATATCTAGCGTATCAGAAAAGGTAG
TTCCTTTAATGGCAGGACTTTATATATTAGGAGTTTTAATTGTTATAGCTTTTAATTTAGATAAGGTTCCACATGCAGTA
TCAATAATTATTGAAAGTGCCTTTAATCCTAAGGCTGCTTTAGGCGGAGCTGTAGGAGTTAGCATAATAACTGTAATGAA
AAGTGGAATAGCTAGAGGGGTTTTCTCTAATGAAGCTGGTCTTGGAAGTGCTCCAATAGCAGCGGCGGCAGCTAAGACTA
AGTCTCCAGTTAAGCAAGGACTTATTTCAATGACAGGTACATTCTTTGATACAATTCTTATTTGTACAATGACAGGTATA
GTAATAATTCTTACTGGTGCTTATAGTGGAAGTTTAGAAGGAGCAGCACTTACAACACAGGCTTTTGAAATAGGTCTTCC
TATAAGTAATATAGGAACATATATAGTTAATATAGGACTTATGTTCTTTGCATTTACTACAATATTAGGATGGAACTATT
ATGGAGAAAGATGTATTGAGTACTTATTTGGAATAAAAGCTATAAAACCATATAGAATTTTATATATAATTTTAGTTGCT
ATAGGATCATTCTTACCATTAACATTAATATTTATAATTGCAGATATTGTTAATGGATTAATGGCAATTCCAAACCTTGT
AGGTATTATTGGATTAAGAAAAGTAGTAATAGAAGAAACAGAGGAATTCTTTAGAGAAAAAGCTTTAAGTGAAGAGAGTG
CAGAATTAGAAGGAACTGTTTTAAATTAA

Upstream 100 bases:

>100_bases
AAACTCTCAGGTAAAAGGACAGAGGATAAGGTTAGTTACTTAAATTTTTTAAGTATCCTTATTCTCCTCCGCAAATTTAA
ATTTAAGGAGGATTTTTTTT

Downstream 100 bases:

>100_bases
TATAAATAAAAAATCCATGAGTAAAATTTACTCATGGATTTTTTTATCTTCCTTCATTAGGAAGTTTACTTCTAACTATA
TTTTCAACTTTTTCAGGAAG

Product: amino acid ABC transporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MENLLNQIDNLVWGVPLLMLLVGTGIYLTIRLKLLQILKLPLALKYVFKKDEETSCEDAEGDVSSFGALCTALSATIGTG
NIVGVATAIKAGGPGALFWMWVAAFFGMATKYAEGVLAIKYRVVDENGQMAGGPMYYIKNGLGLNWLANIFAFFGIGVAL
LGIGTFGQVKSITDAASITFNVPTIITAGVVTLLVALVILGGIKRISSVSEKVVPLMAGLYILGVLIVIAFNLDKVPHAV
SIIIESAFNPKAALGGAVGVSIITVMKSGIARGVFSNEAGLGSAPIAAAAAKTKSPVKQGLISMTGTFFDTILICTMTGI
VIILTGAYSGSLEGAALTTQAFEIGLPISNIGTYIVNIGLMFFAFTTILGWNYYGERCIEYLFGIKAIKPYRILYIILVA
IGSFLPLTLIFIIADIVNGLMAIPNLVGIIGLRKVVIEETEEFFREKALSEESAELEGTVLN

Sequences:

>Translated_462_residues
MENLLNQIDNLVWGVPLLMLLVGTGIYLTIRLKLLQILKLPLALKYVFKKDEETSCEDAEGDVSSFGALCTALSATIGTG
NIVGVATAIKAGGPGALFWMWVAAFFGMATKYAEGVLAIKYRVVDENGQMAGGPMYYIKNGLGLNWLANIFAFFGIGVAL
LGIGTFGQVKSITDAASITFNVPTIITAGVVTLLVALVILGGIKRISSVSEKVVPLMAGLYILGVLIVIAFNLDKVPHAV
SIIIESAFNPKAALGGAVGVSIITVMKSGIARGVFSNEAGLGSAPIAAAAAKTKSPVKQGLISMTGTFFDTILICTMTGI
VIILTGAYSGSLEGAALTTQAFEIGLPISNIGTYIVNIGLMFFAFTTILGWNYYGERCIEYLFGIKAIKPYRILYIILVA
IGSFLPLTLIFIIADIVNGLMAIPNLVGIIGLRKVVIEETEEFFREKALSEESAELEGTVLN
>Mature_462_residues
MENLLNQIDNLVWGVPLLMLLVGTGIYLTIRLKLLQILKLPLALKYVFKKDEETSCEDAEGDVSSFGALCTALSATIGTG
NIVGVATAIKAGGPGALFWMWVAAFFGMATKYAEGVLAIKYRVVDENGQMAGGPMYYIKNGLGLNWLANIFAFFGIGVAL
LGIGTFGQVKSITDAASITFNVPTIITAGVVTLLVALVILGGIKRISSVSEKVVPLMAGLYILGVLIVIAFNLDKVPHAV
SIIIESAFNPKAALGGAVGVSIITVMKSGIARGVFSNEAGLGSAPIAAAAAKTKSPVKQGLISMTGTFFDTILICTMTGI
VIILTGAYSGSLEGAALTTQAFEIGLPISNIGTYIVNIGLMFFAFTTILGWNYYGERCIEYLFGIKAIKPYRILYIILVA
IGSFLPLTLIFIIADIVNGLMAIPNLVGIIGLRKVVIEETEEFFREKALSEESAELEGTVLN

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=460, Percent_Identity=36.0869565217391, Blast_Score=263, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48890; Mature: 48890

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLLNQIDNLVWGVPLLMLLVGTGIYLTIRLKLLQILKLPLALKYVFKKDEETSCEDAE
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GDVSSFGALCTALSATIGTGNIVGVATAIKAGGPGALFWMWVAAFFGMATKYAEGVLAIK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE
YRVVDENGQMAGGPMYYIKNGLGLNWLANIFAFFGIGVALLGIGTFGQVKSITDAASITF
EEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
NVPTIITAGVVTLLVALVILGGIKRISSVSEKVVPLMAGLYILGVLIVIAFNLDKVPHAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SIIIESAFNPKAALGGAVGVSIITVMKSGIARGVFSNEAGLGSAPIAAAAAKTKSPVKQG
HHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LISMTGTFFDTILICTMTGIVIILTGAYSGSLEGAALTTQAFEIGLPISNIGTYIVNIGL
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHH
MFFAFTTILGWNYYGERCIEYLFGIKAIKPYRILYIILVAIGSFLPLTLIFIIADIVNGL
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAIPNLVGIIGLRKVVIEETEEFFREKALSEESAELEGTVLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MENLLNQIDNLVWGVPLLMLLVGTGIYLTIRLKLLQILKLPLALKYVFKKDEETSCEDAE
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GDVSSFGALCTALSATIGTGNIVGVATAIKAGGPGALFWMWVAAFFGMATKYAEGVLAIK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE
YRVVDENGQMAGGPMYYIKNGLGLNWLANIFAFFGIGVALLGIGTFGQVKSITDAASITF
EEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
NVPTIITAGVVTLLVALVILGGIKRISSVSEKVVPLMAGLYILGVLIVIAFNLDKVPHAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SIIIESAFNPKAALGGAVGVSIITVMKSGIARGVFSNEAGLGSAPIAAAAAKTKSPVKQG
HHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LISMTGTFFDTILICTMTGIVIILTGAYSGSLEGAALTTQAFEIGLPISNIGTYIVNIGL
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHH
MFFAFTTILGWNYYGERCIEYLFGIKAIKPYRILYIILVAIGSFLPLTLIFIIADIVNGL
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAIPNLVGIIGLRKVVIEETEEFFREKALSEESAELEGTVLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]