Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310406

Identifier: 18310406

GI number: 18310406

Start: 1678221

End: 1678661

Strand: Reverse

Name: 18310406

Synonym: CPE1424

Alternate gene names: NA

Gene position: 1678661-1678221 (Counterclockwise)

Preceding gene: 18310407

Following gene: 18310402

Centisome position: 55.38

GC content: 26.76

Gene sequence:

>441_bases
ATGTTAGAACCTAAGGTTAAAAGAAAAATCTTTGTTTATGGAAGTTTGAGAACAGGATTTTTCAATTATGAAAAATACTT
AAAAGGGAAAGTTATAAAAAGTGAATTAGGAAGGGTAAAGGGAACTTTATATCATATGCCTAAAAAAGGATATCCTGCTT
TAATTGAAGGGGATGGATTTGTATATGGAGAAGTTATGACTATTCTTGATTACGAAAATGTTATAAATGCTATGGATCTT
ATGGAAGGATACTTAGGAGTTAATAACAAAAATAATGAATATAATAGAATTGAGATGGATGTTGAAATCTTAGGAAAGAA
ATCTTCTGAAAAATGTTATGTTTATTATTATGGAATGAATGATAAAGATGACTTTGAAAATAACAGTATATTAATACAGG
ATGGAAATTGGAGAAACTTTATGCTTAAAAAAGTTTCTTAA

Upstream 100 bases:

>100_bases
CTATGGCTATTAATGATATAGCAAAAGGATTAGAGCTTAGTATAAAGGCTATAGTTTTAAATGATAATGATATTAAAACT
GTAGGAGGAGCTGTTTGTTA

Downstream 100 bases:

>100_bases
AGTAAAAAATAAGAGGTAAGAAAATTCTTACCTCTTATTTTTTGTTATTATTTCATTGATTGTTCGTATTTTTCTACCAT
TCTTTTAACCATTTCTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: BtrG Family Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLEPKVKRKIFVYGSLRTGFFNYEKYLKGKVIKSELGRVKGTLYHMPKKGYPALIEGDGFVYGEVMTILDYENVINAMDL
MEGYLGVNNKNNEYNRIEMDVEILGKKSSEKCYVYYYGMNDKDDFENNSILIQDGNWRNFMLKKVS

Sequences:

>Translated_146_residues
MLEPKVKRKIFVYGSLRTGFFNYEKYLKGKVIKSELGRVKGTLYHMPKKGYPALIEGDGFVYGEVMTILDYENVINAMDL
MEGYLGVNNKNNEYNRIEMDVEILGKKSSEKCYVYYYGMNDKDDFENNSILIQDGNWRNFMLKKVS
>Mature_146_residues
MLEPKVKRKIFVYGSLRTGFFNYEKYLKGKVIKSELGRVKGTLYHMPKKGYPALIEGDGFVYGEVMTILDYENVINAMDL
MEGYLGVNNKNNEYNRIEMDVEILGKKSSEKCYVYYYGMNDKDDFENNSILIQDGNWRNFMLKKVS

Specific function: Unknown

COG id: COG2105

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17065; Mature: 17065

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEPKVKRKIFVYGSLRTGFFNYEKYLKGKVIKSELGRVKGTLYHMPKKGYPALIEGDGF
CCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHCEEEEECCCCCCCEEEECCCE
VYGEVMTILDYENVINAMDLMEGYLGVNNKNNEYNRIEMDVEILGKKSSEKCYVYYYGMN
EEEHEEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECC
DKDDFENNSILIQDGNWRNFMLKKVS
CCCCCCCCEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MLEPKVKRKIFVYGSLRTGFFNYEKYLKGKVIKSELGRVKGTLYHMPKKGYPALIEGDGF
CCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHCEEEEECCCCCCCEEEECCCE
VYGEVMTILDYENVINAMDLMEGYLGVNNKNNEYNRIEMDVEILGKKSSEKCYVYYYGMN
EEEHEEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECC
DKDDFENNSILIQDGNWRNFMLKKVS
CCCCCCCCEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA