Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310362

Identifier: 18310362

GI number: 18310362

Start: 1631454

End: 1631780

Strand: Reverse

Name: 18310362

Synonym: CPE1380

Alternate gene names: NA

Gene position: 1631780-1631454 (Counterclockwise)

Preceding gene: 18310364

Following gene: 18310361

Centisome position: 53.83

GC content: 24.46

Gene sequence:

>327_bases
ATGCTTATTGCTATTTTATTATTATTACTAAGTATTTTTAACATATTTATAGGAAAAAAAGTGAAGGATAAAAATCTAGC
TCATCTTTTATCAGGTTTTGATAAGGAAAAAGATGATTTAGAGTACGTAAGTAGTGTCTTAGGAAATACCTTTAAGTGGA
TTGGAAATTTAGGGGTTATAATTACAGCTATTTATTTGATTCTAATTAATAGTATTTCAGTAGGATTATATTTAATTTGT
TATGTGGGAGTTATAATACTATTTACAGTTAATCTTACCTTTAAAACAGATAGACACAGAAGAAGTAGATTAAAAGTATC
AAAATAA

Upstream 100 bases:

>100_bases
AAAAGTAAAATTAAAAAAATATTTAATAAAGTCAAGTGGAAACTGAGAATATATATGTAAAATTATAGTATTATATAATA
AAAGGGTCTTAGGAGGATAT

Downstream 100 bases:

>100_bases
ATTAAAAGTACTAAAAGTTAAAATCTTTTAGTACTTTTTTAAATTACTTTAAACTTTACTAAATTTTAATCAAAATATAT
GATTTTAATTTATAATATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVIITAIYLILINSISVGLYLIC
YVGVIILFTVNLTFKTDRHRRSRLKVSK

Sequences:

>Translated_108_residues
MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVIITAIYLILINSISVGLYLIC
YVGVIILFTVNLTFKTDRHRRSRLKVSK
>Mature_108_residues
MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVIITAIYLILINSISVGLYLIC
YVGVIILFTVNLTFKTDRHRRSRLKVSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12228; Mature: 12228

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVI
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ITAIYLILINSISVGLYLICYVGVIILFTVNLTFKTDRHRRSRLKVSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure
MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVI
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ITAIYLILINSISVGLYLICYVGVIILFTVNLTFKTDRHRRSRLKVSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA