Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is thiT [H]

Identifier: 18310354

GI number: 18310354

Start: 1623511

End: 1624206

Strand: Direct

Name: thiT [H]

Synonym: CPE1372

Alternate gene names: 18310354

Gene position: 1623511-1624206 (Clockwise)

Preceding gene: 18310353

Following gene: 18310355

Centisome position: 53.56

GC content: 29.17

Gene sequence:

>696_bases
ATGATGTCATTTTCACAAATAATAAATGATTTTATTCAAAGTTTTTCATCAATTAATTTAGGAGGAAATTTTAAGGAGAT
TGTAACTAATCCACTAACAATTCTCACTTTAATAGGAGTCCTAATAATATTAGTTTTACTTATAAAGGCTAAAGACATCA
AATTTGATGCAAAAATGCTTACAACAATAGGAATTGCTTTAGCACTTACTGCTGTATTAAACATGCTAAAGATATATAAA
TTTCCTCAAGGTGGAGGAATAACCTTAGGTAGTATGATTCCTATAATACTTATTGCTTATGCTTATGGTCCATTAGTTGG
AATGCTTACAGGATTTTTATTTGGTATAATTTCCTTATTTATAGATCCATATATACTTCATCCTGTACAAGTATTATTTG
ATTATCCTATACCATATATGGCTTTAGGGGTAGCAGGATTCTTTAAAAATCATAGAATTTCAGGAGCTGTAGTAGCAATA
TTCTTAAAATTTTTAGCTCACTTTATTTCAGGAGTTGTTTTCTTCGGATCCTTTGCTCCTGAAGGAATGTCTCCAATTCT
ATATTCATTTTTAGTAAATGGTTCTTTAATAGGAGCTGATGGCTTAATATGTGTAATACTTTTAGGTATTTTACCTGTTA
ATAGACTTATTAAAGCCATAAGTTCTAAAAGCGTAACAAGCAAATACGCATCTTAA

Upstream 100 bases:

>100_bases
GGCTGTATTTAACACCGGATCTATATTTAGATTCGGTTTTTTTATTTACATTCTTTAGACTCTCTAAGCACACTTAAAGT
TTAAGGAGGGGGTAAAAACT

Downstream 100 bases:

>100_bases
AATAAAGTAAGGTCTAGATTTCATTAAAATCTAGACCTTTTTATTTTTTAATTAAAGAATTATACTATAGATAAGAGATA
AAAAGTTATATAAACTTAGG

Product: putative proton-coupled thiamine transporter YuaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MMSFSQIINDFIQSFSSINLGGNFKEIVTNPLTILTLIGVLIILVLLIKAKDIKFDAKMLTTIGIALALTAVLNMLKIYK
FPQGGGITLGSMIPIILIAYAYGPLVGMLTGFLFGIISLFIDPYILHPVQVLFDYPIPYMALGVAGFFKNHRISGAVVAI
FLKFLAHFISGVVFFGSFAPEGMSPILYSFLVNGSLIGADGLICVILLGILPVNRLIKAISSKSVTSKYAS

Sequences:

>Translated_231_residues
MMSFSQIINDFIQSFSSINLGGNFKEIVTNPLTILTLIGVLIILVLLIKAKDIKFDAKMLTTIGIALALTAVLNMLKIYK
FPQGGGITLGSMIPIILIAYAYGPLVGMLTGFLFGIISLFIDPYILHPVQVLFDYPIPYMALGVAGFFKNHRISGAVVAI
FLKFLAHFISGVVFFGSFAPEGMSPILYSFLVNGSLIGADGLICVILLGILPVNRLIKAISSKSVTSKYAS
>Mature_231_residues
MMSFSQIINDFIQSFSSINLGGNFKEIVTNPLTILTLIGVLIILVLLIKAKDIKFDAKMLTTIGIALALTAVLNMLKIYK
FPQGGGITLGSMIPIILIAYAYGPLVGMLTGFLFGIISLFIDPYILHPVQVLFDYPIPYMALGVAGFFKNHRISGAVVAI
FLKFLAHFISGVVFFGSFAPEGMSPILYSFLVNGSLIGADGLICVILLGILPVNRLIKAISSKSVTSKYAS

Specific function: Probable proton-coupled thiamine transporter [H]

COG id: COG3859

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proton-coupled thiamine transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012651 [H]

Pfam domain/function: PF09515 Thia_YuaJ [H]

EC number: NA

Molecular weight: Translated: 24902; Mature: 24902

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSFSQIINDFIQSFSSINLGGNFKEIVTNPLTILTLIGVLIILVLLIKAKDIKFDAKML
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TTIGIALALTAVLNMLKIYKFPQGGGITLGSMIPIILIAYAYGPLVGMLTGFLFGIISLF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDPYILHPVQVLFDYPIPYMALGVAGFFKNHRISGAVVAIFLKFLAHFISGVVFFGSFAP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGMSPILYSFLVNGSLIGADGLICVILLGILPVNRLIKAISSKSVTSKYAS
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSFSQIINDFIQSFSSINLGGNFKEIVTNPLTILTLIGVLIILVLLIKAKDIKFDAKML
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TTIGIALALTAVLNMLKIYKFPQGGGITLGSMIPIILIAYAYGPLVGMLTGFLFGIISLF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDPYILHPVQVLFDYPIPYMALGVAGFFKNHRISGAVVAIFLKFLAHFISGVVFFGSFAP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGMSPILYSFLVNGSLIGADGLICVILLGILPVNRLIKAISSKSVTSKYAS
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]