| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310276
Identifier: 18310276
GI number: 18310276
Start: 1528817
End: 1529425
Strand: Reverse
Name: 18310276
Synonym: CPE1294
Alternate gene names: NA
Gene position: 1529425-1528817 (Counterclockwise)
Preceding gene: 18310277
Following gene: 18310274
Centisome position: 50.45
GC content: 29.39
Gene sequence:
>609_bases ATGAGAATTTTAAAAGGGGTAATTTTAGCTATAATTCCAGTATTCTTATTTATGGGATGTGGAGACTTTTCTAAAAAGGA TGTTGCAAAGATAAGTTTTGAGCCGTTTTCAGAAAAAGAGGAGCAGATTTTAAATTTGACTGAAAATAGAGTTTTTTTCT ATAAGGTGAAAAACATTTCTAAAGGTAAGGGATATAAGATTGATTTAAATTATGAGGTTTATAAAGAGGGGAAAGAAGTT AAAAATGAACCTATTTTAACAAGTGTAAGTGAAATCTATGAAAAGGGGAAAGAGAATATAACCTTAGGAATAAACTTTAA AGATGATAATAGGATAAATTGTCTTTTAGGAGGAGATGGAGCTTATAGTCGTCATAATTACAAGGCTGAAGAAAATATAA AGGACTATTTTAGTGCTAATTTTGCTGGTGATTATGATTTAGAGCTTGAAAAAGGAAAGAGGCTTTGTCTTTATTATGCA ACTTCAGGAAATGGAATTAGTAGTAATGTTATAGGAATGAACATGGATTCAGAGGAAATAAAAGAAGCTATTAATAAAAG CAAAGACTGTATTTTCTTAAGTATAAGTGTAGAGGATTATAGTGAGTAG
Upstream 100 bases:
>100_bases ACTAGTTTAGGATTTTATCATATAATATAAAAAATAGTTGCAATTAATATAAATAGGGATTTGCAAATTATAATATAAAA TTTAATATAGGGGTGTTTTA
Downstream 100 bases:
>100_bases TTTATAAATTTATTTTAGAGATTAAAATAAATCTAAAAGAGTAAATGTTCCTTATAAAAGTTAGTAGTTTATAAATAGAA TTTAGAGCCTTAATAAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MRILKGVILAIIPVFLFMGCGDFSKKDVAKISFEPFSEKEEQILNLTENRVFFYKVKNISKGKGYKIDLNYEVYKEGKEV KNEPILTSVSEIYEKGKENITLGINFKDDNRINCLLGGDGAYSRHNYKAEENIKDYFSANFAGDYDLELEKGKRLCLYYA TSGNGISSNVIGMNMDSEEIKEAINKSKDCIFLSISVEDYSE
Sequences:
>Translated_202_residues MRILKGVILAIIPVFLFMGCGDFSKKDVAKISFEPFSEKEEQILNLTENRVFFYKVKNISKGKGYKIDLNYEVYKEGKEV KNEPILTSVSEIYEKGKENITLGINFKDDNRINCLLGGDGAYSRHNYKAEENIKDYFSANFAGDYDLELEKGKRLCLYYA TSGNGISSNVIGMNMDSEEIKEAINKSKDCIFLSISVEDYSE >Mature_202_residues MRILKGVILAIIPVFLFMGCGDFSKKDVAKISFEPFSEKEEQILNLTENRVFFYKVKNISKGKGYKIDLNYEVYKEGKEV KNEPILTSVSEIYEKGKENITLGINFKDDNRINCLLGGDGAYSRHNYKAEENIKDYFSANFAGDYDLELEKGKRLCLYYA TSGNGISSNVIGMNMDSEEIKEAINKSKDCIFLSISVEDYSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22967; Mature: 22967
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILKGVILAIIPVFLFMGCGDFSKKDVAKISFEPFSEKEEQILNLTENRVFFYKVKNIS CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCC KGKGYKIDLNYEVYKEGKEVKNEPILTSVSEIYEKGKENITLGINFKDDNRINCLLGGDG CCCCEEEEECHHHHHCCHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCC AYSRHNYKAEENIKDYFSANFAGDYDLELEKGKRLCLYYATSGNGISSNVIGMNMDSEEI CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEECCCCHHHH KEAINKSKDCIFLSISVEDYSE HHHHCCCCCEEEEEEECCCCCC >Mature Secondary Structure MRILKGVILAIIPVFLFMGCGDFSKKDVAKISFEPFSEKEEQILNLTENRVFFYKVKNIS CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCC KGKGYKIDLNYEVYKEGKEVKNEPILTSVSEIYEKGKENITLGINFKDDNRINCLLGGDG CCCCEEEEECHHHHHCCHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCC AYSRHNYKAEENIKDYFSANFAGDYDLELEKGKRLCLYYATSGNGISSNVIGMNMDSEEI CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEECCCCHHHH KEAINKSKDCIFLSISVEDYSE HHHHCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA