Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310267

Identifier: 18310267

GI number: 18310267

Start: 1514831

End: 1515928

Strand: Reverse

Name: 18310267

Synonym: CPE1285

Alternate gene names: NA

Gene position: 1515928-1514831 (Counterclockwise)

Preceding gene: 18310269

Following gene: 18310266

Centisome position: 50.01

GC content: 28.78

Gene sequence:

>1098_bases
ATGGAAAATACATGGGAGAAAAAGTGGGTAGAGGACATTGAATATTTAAAAGAAGAGCTTAAGAAAAGGCATAATAATCT
ATTTGCTTATACAGAGGAAGAAAGTTTTAATGAAAAGATAGAGAATTTAAAAAACATGTTTAATGAACTAGATTATGAGG
AGATAAAGGTTGAAATATCAAGGGTTGTGGCTTCTTTAAAGGATGCTCATACTTCGCTTATATTTCCTGCTAAAAGGTTT
ATTCCATTAAAGTTTTATTATTTTAATGATGGGGTATATATTATAAATACATGCAAAGGATATGAAAACCTATTGTTTAA
AAAGGTTTTAGCCCTTGGTGATATGAAAATAGAAGAGGTTTTAGAGGAACTTTCTAATATTATTTCCTTTGAAAATGAGT
ATTTCTTTAAGGCTCAAAGTATGAAATATATGCAAATAGCAGAGGTTTTATATGGACTTTTAATAATTGATACCATGGAT
AAAATAAAAATAACATTAGACGACGGAGAATATGAGGTTTTAACCTGTTCCTTTGAGGATTTACTTTATACAAATAAAAG
ACTGCCTATGTATGCTAAAAATGATTCTGAAAATCTTTGGTTTCAAATTTTAGGGAGTGGAGAGTTATACATAAAATATA
ATAGCTGTAGAGAACAGGGAGAGGAAAGCATAGAGAAAAAGATTGAAAATATAATATGCCTAATTGAGAAGGAAAATATA
GAAAAGGTAACTGTAGATTTAAGAAATAACTTAGGAGGAGATTCAACACTTTTTACTCCTTTAATAGATTATTTAAAGAA
CAGTGAAAAGATAAATAAAAAGGAGAATTTAAAAGTTATAATAGGAAGAGAAACTTTTTCTTCAGCCCTTTTAAATGCTT
ATACCTTTAAAAATAGTACTAATGCAAAAATAATAGGGGAACCTAGTGGAGGAAAGCCTAATTGTTATGGGGAGATCTTA
AGGATTACTCTTCCTAATAGTAAGCTTGTAATTACTTATTCTACAAGATTTTATAAACTTATAGAAGAGGATTCAGTTAT
GGCTCTTTATCCAGAGGAGGTTCTTTTAGAGTCCATAGAGGATTATATAAATAAATAG

Upstream 100 bases:

>100_bases
GATAAATAAAGAATTAAAGATAAATTTAAAATAATCTATATATATTTGAAACATAAATTTATAGTATTAGTATTTTAATA
TTATCTGCAAAGGAGAGCTT

Downstream 100 bases:

>100_bases
CATATGAAATAACAGAGTTTATTACTAGTTCACTTTTAAGAAATTATATATTTTAATAGGCAAAAAAATTTTTATATAGA
GTTTATTAATATGTTCAACC

Product: peptidase, S41 family

Products: NA

Alternate protein names: Peptidase S; S41 Family Peptidase

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MENTWEKKWVEDIEYLKEELKKRHNNLFAYTEEESFNEKIENLKNMFNELDYEEIKVEISRVVASLKDAHTSLIFPAKRF
IPLKFYYFNDGVYIINTCKGYENLLFKKVLALGDMKIEEVLEELSNIISFENEYFFKAQSMKYMQIAEVLYGLLIIDTMD
KIKITLDDGEYEVLTCSFEDLLYTNKRLPMYAKNDSENLWFQILGSGELYIKYNSCREQGEESIEKKIENIICLIEKENI
EKVTVDLRNNLGGDSTLFTPLIDYLKNSEKINKKENLKVIIGRETFSSALLNAYTFKNSTNAKIIGEPSGGKPNCYGEIL
RITLPNSKLVITYSTRFYKLIEEDSVMALYPEEVLLESIEDYINK

Sequences:

>Translated_365_residues
MENTWEKKWVEDIEYLKEELKKRHNNLFAYTEEESFNEKIENLKNMFNELDYEEIKVEISRVVASLKDAHTSLIFPAKRF
IPLKFYYFNDGVYIINTCKGYENLLFKKVLALGDMKIEEVLEELSNIISFENEYFFKAQSMKYMQIAEVLYGLLIIDTMD
KIKITLDDGEYEVLTCSFEDLLYTNKRLPMYAKNDSENLWFQILGSGELYIKYNSCREQGEESIEKKIENIICLIEKENI
EKVTVDLRNNLGGDSTLFTPLIDYLKNSEKINKKENLKVIIGRETFSSALLNAYTFKNSTNAKIIGEPSGGKPNCYGEIL
RITLPNSKLVITYSTRFYKLIEEDSVMALYPEEVLLESIEDYINK
>Mature_365_residues
MENTWEKKWVEDIEYLKEELKKRHNNLFAYTEEESFNEKIENLKNMFNELDYEEIKVEISRVVASLKDAHTSLIFPAKRF
IPLKFYYFNDGVYIINTCKGYENLLFKKVLALGDMKIEEVLEELSNIISFENEYFFKAQSMKYMQIAEVLYGLLIIDTMD
KIKITLDDGEYEVLTCSFEDLLYTNKRLPMYAKNDSENLWFQILGSGELYIKYNSCREQGEESIEKKIENIICLIEKENI
EKVTVDLRNNLGGDSTLFTPLIDYLKNSEKINKKENLKVIIGRETFSSALLNAYTFKNSTNAKIIGEPSGGKPNCYGEIL
RITLPNSKLVITYSTRFYKLIEEDSVMALYPEEVLLESIEDYINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42708; Mature: 42708

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00214 FABP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTWEKKWVEDIEYLKEELKKRHNNLFAYTEEESFNEKIENLKNMFNELDYEEIKVEIS
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHH
RVVASLKDAHTSLIFPAKRFIPLKFYYFNDGVYIINTCKGYENLLFKKVLALGDMKIEEV
HHHHHHHHHHHHEEECHHHCEEEEEEEEECCEEEEEECCCHHHHHHHHHHHHCCCHHHHH
LEELSNIISFENEYFFKAQSMKYMQIAEVLYGLLIIDTMDKIKITLDDGEYEVLTCSFED
HHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHEECCCEEEEEEECCCEEEEEEEHHH
LLYTNKRLPMYAKNDSENLWFQILGSGELYIKYNSCREQGEESIEKKIENIICLIEKENI
HHHCCCCCCEEECCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHEEEEEEECCC
EKVTVDLRNNLGGDSTLFTPLIDYLKNSEKINKKENLKVIIGRETFSSALLNAYTFKNST
EEEEEEHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHEECCCC
NAKIIGEPSGGKPNCYGEILRITLPNSKLVITYSTRFYKLIEEDSVMALYPEEVLLESIE
CCEEEECCCCCCCCCCEEEEEEEECCCEEEEEECHHHHHHHCCCCEEEECCHHHHHHHHH
DYINK
HHHCC
>Mature Secondary Structure
MENTWEKKWVEDIEYLKEELKKRHNNLFAYTEEESFNEKIENLKNMFNELDYEEIKVEIS
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHH
RVVASLKDAHTSLIFPAKRFIPLKFYYFNDGVYIINTCKGYENLLFKKVLALGDMKIEEV
HHHHHHHHHHHHEEECHHHCEEEEEEEEECCEEEEEECCCHHHHHHHHHHHHCCCHHHHH
LEELSNIISFENEYFFKAQSMKYMQIAEVLYGLLIIDTMDKIKITLDDGEYEVLTCSFED
HHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHEECCCEEEEEEECCCEEEEEEEHHH
LLYTNKRLPMYAKNDSENLWFQILGSGELYIKYNSCREQGEESIEKKIENIICLIEKENI
HHHCCCCCCEEECCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHEEEEEEECCC
EKVTVDLRNNLGGDSTLFTPLIDYLKNSEKINKKENLKVIIGRETFSSALLNAYTFKNST
EEEEEEHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHEECCCC
NAKIIGEPSGGKPNCYGEILRITLPNSKLVITYSTRFYKLIEEDSVMALYPEEVLLESIE
CCEEEECCCCCCCCCCEEEEEEEECCCEEEEEECHHHHHHHCCCCEEEECCHHHHHHHHH
DYINK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA