| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310219
Identifier: 18310219
GI number: 18310219
Start: 1444528
End: 1445139
Strand: Reverse
Name: 18310219
Synonym: CPE1237
Alternate gene names: NA
Gene position: 1445139-1444528 (Counterclockwise)
Preceding gene: 18310221
Following gene: 18310218
Centisome position: 47.67
GC content: 20.1
Gene sequence:
>612_bases ATGCTTAAGGTATTTTTTTCTTTTAAAAAACATTTTATAGAACATAAGCTATTGATTCTTTCAGTGGTTCTTTCACTATT TATGTCTAGCATATTAAAATGGAGTTTCTTCAAATATATAGTTGGTATATTATCTTTTTGTATGATTATGCTAGACTATA AAGAGAGTTTAGATAATTTTGTTGAAAGCAAAAAATTAATATATAAAAAGTATATAAGGAATATATTCTTTTTAGTTGAT AGTTTAATTGTAGGATTTATAATAAATGAAGTATTTTGGATACTTACTAAAAATGAAATATTTCAATTTAAAGAAGGGGT TTTAAAGAGTACATTAATAACAACAATAAGTATAATAGCCATAGTTAATATTGTTTATGCACTTTTTCTAGAAAAATTAG ATTTTGAAGACATAAAGTGGATAAGTATTGTCTTAACTTTATTTATAATGAATAGCAATGTTATTAATGGAACAATAAAC AGTTTATACATAATTCAAAGTAAGGATGGATTAAATTTAATTATTACCTTAATAATTGTTTTAGGTATATTTTTTATTAG CTATTATATATTTAAAACTTTGATTTTACAAAGTATTAAATTAAAAAAATAA
Upstream 100 bases:
>100_bases TGTTTTAATTTGGAAGAGGGAAAATATCCTATGTTATTATTCATATAAAAGTGTTAGAATAGATACAAAGGAAATAAGTT ACATCAAGGGAGGACTTAAT
Downstream 100 bases:
>100_bases ATATAAAAATAGGTATTGGGAAGAATAATAATAAATTATTTCAAATATGAGGAGGTAAAAAATGAAAAATAATTTTTTAA AACACAAAAAAAGTCCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLKVFFSFKKHFIEHKLLILSVVLSLFMSSILKWSFFKYIVGILSFCMIMLDYKESLDNFVESKKLIYKKYIRNIFFLVD SLIVGFIINEVFWILTKNEIFQFKEGVLKSTLITTISIIAIVNIVYALFLEKLDFEDIKWISIVLTLFIMNSNVINGTIN SLYIIQSKDGLNLIITLIIVLGIFFISYYIFKTLILQSIKLKK
Sequences:
>Translated_203_residues MLKVFFSFKKHFIEHKLLILSVVLSLFMSSILKWSFFKYIVGILSFCMIMLDYKESLDNFVESKKLIYKKYIRNIFFLVD SLIVGFIINEVFWILTKNEIFQFKEGVLKSTLITTISIIAIVNIVYALFLEKLDFEDIKWISIVLTLFIMNSNVINGTIN SLYIIQSKDGLNLIITLIIVLGIFFISYYIFKTLILQSIKLKK >Mature_203_residues MLKVFFSFKKHFIEHKLLILSVVLSLFMSSILKWSFFKYIVGILSFCMIMLDYKESLDNFVESKKLIYKKYIRNIFFLVD SLIVGFIINEVFWILTKNEIFQFKEGVLKSTLITTISIIAIVNIVYALFLEKLDFEDIKWISIVLTLFIMNSNVINGTIN SLYIIQSKDGLNLIITLIIVLGIFFISYYIFKTLILQSIKLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23820; Mature: 23820
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVFFSFKKHFIEHKLLILSVVLSLFMSSILKWSFFKYIVGILSFCMIMLDYKESLDNF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VESKKLIYKKYIRNIFFLVDSLIVGFIINEVFWILTKNEIFQFKEGVLKSTLITTISIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVNIVYALFLEKLDFEDIKWISIVLTLFIMNSNVINGTINSLYIIQSKDGLNLIITLIIV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCCHHHHHHHHHH LGIFFISYYIFKTLILQSIKLKK HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKVFFSFKKHFIEHKLLILSVVLSLFMSSILKWSFFKYIVGILSFCMIMLDYKESLDNF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VESKKLIYKKYIRNIFFLVDSLIVGFIINEVFWILTKNEIFQFKEGVLKSTLITTISIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVNIVYALFLEKLDFEDIKWISIVLTLFIMNSNVINGTINSLYIIQSKDGLNLIITLIIV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCCHHHHHHHHHH LGIFFISYYIFKTLILQSIKLKK HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA