Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is cbiE [H]

Identifier: 18310207

GI number: 18310207

Start: 1427785

End: 1428396

Strand: Reverse

Name: cbiE [H]

Synonym: CPE1225

Alternate gene names: 18310207

Gene position: 1428396-1427785 (Counterclockwise)

Preceding gene: 18310208

Following gene: 18310206

Centisome position: 47.12

GC content: 26.8

Gene sequence:

>612_bases
TTGGTTAAAATATTAGGATTAGGACCAGGCCATGAAGACTATATAATTCCTAAAGTTATTAAGGAACTAGAAAAAAGTGA
TTATATAGTTGGTTTTGAAAGAGCAATTTCTAGCTTAAAGTTTTTAAATAGTATAAATGATGAAAGATTTAAGAGAGTAA
AAGGTTTAAAAGAAATAATAGAATTTCTAAATGAAAATAAGGAAAAGAGGATTTCAATAGTTGCCTCAGGAGATCCAACC
TTTTATGGAATTACAAATTATATATGTAAAAATTATGAGGGAGAAGTTTCTATTGTTCCTGGAATAAGTTCTTTTCAATA
TTTAACATGCAGAGTTAATAAAACTTGGAATGATGCTTTTGTTGGAAGTATGCATGGAAGAGAAGAGAATTTTATAGAAG
TTGTGAAGGAAAATAAACTTTCTATTTGGTTAACAGATAAAAAAAATACTCCTTTTGAGCTAAGTAAAAGGTTAATAGAA
AATTCTATAGAATGTACTATATATGTTGGAGAAAATCTTTCTTATGAAGATGAAAATATAACAATTGGAAGCCCAAGAGA
AATTTGCGAAAAGGATTATGGAGATTTATCTGTAATAATAATTGAAAGATAA

Upstream 100 bases:

>100_bases
TATTCTTATGTACTATGGATCAAAGGAAATGAAGTTACTATATGAATCTAAAAATTCAAACTTGTTTGATTAAACTTAAA
TTAGAAAGGAATGAAGGCTT

Downstream 100 bases:

>100_bases
ATTTTCCTTTGGAGGATATATGAAGTTTATAAAAGATTCAGAGTTTATAAGAGGAAAATGTCCTATGACAAAAGAGGATA
TTAGAATCCTTACTATTAGT

Product: precorrin-6y C5,15-methyltransferase (decarboxylating)

Products: S-adenosyl-L-homocysteine; Precorrin 8X; CO2

Alternate protein names: Cobalt-precorrin-6 methyltransferase; Cobalt-precorrin-6Y methylase [H]

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEIIEFLNENKEKRISIVASGDPT
FYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAFVGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIE
NSIECTIYVGENLSYEDENITIGSPREICEKDYGDLSVIIIER

Sequences:

>Translated_203_residues
MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEIIEFLNENKEKRISIVASGDPT
FYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAFVGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIE
NSIECTIYVGENLSYEDENITIGSPREICEKDYGDLSVIIIER
>Mature_203_residues
MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEIIEFLNENKEKRISIVASGDPT
FYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAFVGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIE
NSIECTIYVGENLSYEDENITIGSPREICEKDYGDLSVIIIER

Specific function: Probably catalyzes the methylation of C-5 in cobalt- precorrin-6Y to form cobalt-precorrin-7W-a [H]

COG id: COG2241

COG function: function code H; Precorrin-6B methylase 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the precorrin methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR012818 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: 2.1.1.132

Molecular weight: Translated: 23318; Mature: 23318

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEII
CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EFLNENKEKRISIVASGDPTFYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAF
HHHCCCCCCEEEEEECCCCCEEHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCE
VGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIENSIECTIYVGENLSYEDENI
EECCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEE
TIGSPREICEKDYGDLSVIIIER
EECCCHHHHHCCCCCEEEEEEEC
>Mature Secondary Structure
MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEII
CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EFLNENKEKRISIVASGDPTFYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAF
HHHCCCCCCEEEEEECCCCCEEHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCE
VGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIENSIECTIYVGENLSYEDENI
EECCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEE
TIGSPREICEKDYGDLSVIIIER
EECCCHHHHHCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-adenosyl-L-methionine; Precorrin 6Y

Specific reaction: 2 S-adenosyl-L-methionine + precorrin-6Y = 2 S-adenosyl-L-homocysteine + precorrin-8X + CO2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]