| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is murC [H]
Identifier: 18310170
GI number: 18310170
Start: 1384439
End: 1385794
Strand: Direct
Name: murC [H]
Synonym: CPE1188
Alternate gene names: 18310170
Gene position: 1384439-1385794 (Clockwise)
Preceding gene: 18310157
Following gene: 18310171
Centisome position: 45.67
GC content: 28.24
Gene sequence:
>1356_bases GTGTTTAAAATAGCTATTAAATCTTATCTAAGCATAATCTTATCTAAAATGACACAATTTATTTCAAAGAAAGTTTTTAA AGGTGGAACTAACTTTCCAGGTAAAGTAGCTTTAAAAATCGATAGAAACATTTTAAAAGTAGTTTCTAAAAATTATAAAG TTATTTTAGTTACTGGAACTAATGGAAAGACTACTACTACTTCAATGATATATAATGTCCTTAAAGGTAATGGATTAGAT GTTATAACTAATGCTACTGGAGCAAATCTTTATCCAGGAATAGTTAGTACCTTCGTAGCTAATTACAAATTCTCTTCAAA TAAAGAAAGATATGCAGTAATTGAAGTTGATGAAGCTAACTTAAAATTTATAACAGAGTATATAACTCCAGAAATAATAA CTGTAACTAATCTTTTCAGAGATCAGTTAGATAGATATGGGGAGGTTTATACTACTCTAAATAAAATATTAGAAGGAGTT GTTAAAGTACCAAGTACTACTCTTCTTTTAAATGGAGATGAATCTTTATTAGGAAGACTTGATGTTAAAAATCCTAAAGT TTATTATGGATTCAAAGTTTCTCCAAATAAAAACAAGAATATAGAAATTAATGCTGATGCTAAGTTCTGTAAGTTCTGTA AAGAGCCTTATTCTTATAACTTTATAACATACAATCATCTTGGAAGTTTCTATTGTCCTAACTGTGGATTCAAAAGAGAA GATTTAAAATATAAAGTAGAAGAAATAGTAGAACTTACCCCTGAAAGTTCTAAGGTTGTTATAAATGGTGGTTTATTTAC AATAACTCAACCTGGTACTTATAATATATACAACGGATTATGTGCTTATTCTGTTGCAAAAGAATTACATATTAATGATG AAGTTATTCAAAAATCATTCTCTAATCAAAGTTCATCCTTTGGAAGACAGGAAACAATAAAAATTGGAGATAAGGAAGCT AGAATTATCTTGGTTAAAAATCCAGCTGGATATAATCAAGCCTTAGATACTCTTCTTCTAAATTCAGAAAGCTTTGCTGC AGCATTCTTATTAAATGATAATTATGCAGATGGTAAGGATGTTTCTTGGATCTGGGATGTTGATTTTGAAAAATTAAATT CAATGGACTTAAATGAAATATTTATCTCTGGAATGAGAGCTTATGATATGGCTGTAAGATTGAAAATTGCTAATCTACCA GTTGAAAAGTTTTTAATAAAGGAAGATTTTGAAGGCTTAACAGAGGCAATCAAAAATTCTAAGGAAAACAAGGTTTATAT CCTTGCAACTTATACTGCTATGATTAACTATAGAAAATACTTACATTCCAAAGGTTATATTGATAAGCTTTGGTAG
Upstream 100 bases:
>100_bases TCCCTACTTATTATTAATAAATTACTATATTGGTAAATTAAATACTTTGTGCTATACTATAATAGTTTAAGAAGATTGAC TAAAAAGTAATTGTAAGGTG
Downstream 100 bases:
>100_bases TTAAAGGAGAGATTCATATGGAATTAAATATATGTCACTTATATCCTGATCTACTTAATGTTTATGGAGATGTAGGAAAT ATTTTAATATTAAAGCATAG
Product: UDP-N-acetylmuramyl tripeptide synthetase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MFKIAIKSYLSIILSKMTQFISKKVFKGGTNFPGKVALKIDRNILKVVSKNYKVILVTGTNGKTTTTSMIYNVLKGNGLD VITNATGANLYPGIVSTFVANYKFSSNKERYAVIEVDEANLKFITEYITPEIITVTNLFRDQLDRYGEVYTTLNKILEGV VKVPSTTLLLNGDESLLGRLDVKNPKVYYGFKVSPNKNKNIEINADAKFCKFCKEPYSYNFITYNHLGSFYCPNCGFKRE DLKYKVEEIVELTPESSKVVINGGLFTITQPGTYNIYNGLCAYSVAKELHINDEVIQKSFSNQSSSFGRQETIKIGDKEA RIILVKNPAGYNQALDTLLLNSESFAAAFLLNDNYADGKDVSWIWDVDFEKLNSMDLNEIFISGMRAYDMAVRLKIANLP VEKFLIKEDFEGLTEAIKNSKENKVYILATYTAMINYRKYLHSKGYIDKLW
Sequences:
>Translated_451_residues MFKIAIKSYLSIILSKMTQFISKKVFKGGTNFPGKVALKIDRNILKVVSKNYKVILVTGTNGKTTTTSMIYNVLKGNGLD VITNATGANLYPGIVSTFVANYKFSSNKERYAVIEVDEANLKFITEYITPEIITVTNLFRDQLDRYGEVYTTLNKILEGV VKVPSTTLLLNGDESLLGRLDVKNPKVYYGFKVSPNKNKNIEINADAKFCKFCKEPYSYNFITYNHLGSFYCPNCGFKRE DLKYKVEEIVELTPESSKVVINGGLFTITQPGTYNIYNGLCAYSVAKELHINDEVIQKSFSNQSSSFGRQETIKIGDKEA RIILVKNPAGYNQALDTLLLNSESFAAAFLLNDNYADGKDVSWIWDVDFEKLNSMDLNEIFISGMRAYDMAVRLKIANLP VEKFLIKEDFEGLTEAIKNSKENKVYILATYTAMINYRKYLHSKGYIDKLW >Mature_451_residues MFKIAIKSYLSIILSKMTQFISKKVFKGGTNFPGKVALKIDRNILKVVSKNYKVILVTGTNGKTTTTSMIYNVLKGNGLD VITNATGANLYPGIVSTFVANYKFSSNKERYAVIEVDEANLKFITEYITPEIITVTNLFRDQLDRYGEVYTTLNKILEGV VKVPSTTLLLNGDESLLGRLDVKNPKVYYGFKVSPNKNKNIEINADAKFCKFCKEPYSYNFITYNHLGSFYCPNCGFKRE DLKYKVEEIVELTPESSKVVINGGLFTITQPGTYNIYNGLCAYSVAKELHINDEVIQKSFSNQSSSFGRQETIKIGDKEA RIILVKNPAGYNQALDTLLLNSESFAAAFLLNDNYADGKDVSWIWDVDFEKLNSMDLNEIFISGMRAYDMAVRLKIANLP VEKFLIKEDFEGLTEAIKNSKENKVYILATYTAMINYRKYLHSKGYIDKLW
Specific function: Cell wall formation [H]
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 51057; Mature: 51057
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS01011 FOLYLPOLYGLU_SYNT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKIAIKSYLSIILSKMTQFISKKVFKGGTNFPGKVALKIDRNILKVVSKNYKVILVTGT CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHCCCCEEEEEECC NGKTTTTSMIYNVLKGNGLDVITNATGANLYPGIVSTFVANYKFSSNKERYAVIEVDEAN CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCEECCCCCEEEEEEECCCC LKFITEYITPEIITVTNLFRDQLDRYGEVYTTLNKILEGVVKVPSTTLLLNGDESLLGRL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHEEE DVKNPKVYYGFKVSPNKNKNIEINADAKFCKFCKEPYSYNFITYNHLGSFYCPNCGFKRE ECCCCEEEEEEEECCCCCCCEEEECCHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCHH DLKYKVEEIVELTPESSKVVINGGLFTITQPGTYNIYNGLCAYSVAKELHINDEVIQKSF HHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH SNQSSSFGRQETIKIGDKEARIILVKNPAGYNQALDTLLLNSESFAAAFLLNDNYADGKD CCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCC VSWIWDVDFEKLNSMDLNEIFISGMRAYDMAVRLKIANLPVEKFLIKEDFEGLTEAIKNS CEEEEECCHHHHCCCCHHHHHHHCHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC KENKVYILATYTAMINYRKYLHSKGYIDKLW CCCEEEEEEEHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure MFKIAIKSYLSIILSKMTQFISKKVFKGGTNFPGKVALKIDRNILKVVSKNYKVILVTGT CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHCCCCEEEEEECC NGKTTTTSMIYNVLKGNGLDVITNATGANLYPGIVSTFVANYKFSSNKERYAVIEVDEAN CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCEECCCCCEEEEEEECCCC LKFITEYITPEIITVTNLFRDQLDRYGEVYTTLNKILEGVVKVPSTTLLLNGDESLLGRL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHEEE DVKNPKVYYGFKVSPNKNKNIEINADAKFCKFCKEPYSYNFITYNHLGSFYCPNCGFKRE ECCCCEEEEEEEECCCCCCCEEEECCHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCHH DLKYKVEEIVELTPESSKVVINGGLFTITQPGTYNIYNGLCAYSVAKELHINDEVIQKSF HHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH SNQSSSFGRQETIKIGDKEARIILVKNPAGYNQALDTLLLNSESFAAAFLLNDNYADGKD CCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCC VSWIWDVDFEKLNSMDLNEIFISGMRAYDMAVRLKIANLPVEKFLIKEDFEGLTEAIKNS CEEEEECCHHHHCCCCHHHHHHHCHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC KENKVYILATYTAMINYRKYLHSKGYIDKLW CCCEEEEEEEHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA