| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310113
Identifier: 18310113
GI number: 18310113
Start: 1324150
End: 1324845
Strand: Direct
Name: 18310113
Synonym: CPE1131
Alternate gene names: NA
Gene position: 1324150-1324845 (Clockwise)
Preceding gene: 18310112
Following gene: 18310114
Centisome position: 43.68
GC content: 28.02
Gene sequence:
>696_bases ATGCTAGATTTGCTTTTTAATCTTAAATTTTTAAAACAAGATATAGGGGTAAGTATAGTTAGGCGTTCCCCTGCTATACT TGCTAATAAGAACATAAATGTAATAAATAGAGTTGGAGCAGATGGAGATTTATATGAAGACTTAGGTGGAAGAAAAGACA TTATAATACCAGTAGAGTGTAATTTTATATCAGATAATCCTAAAGAAGTTTTTAGAAGAGTTAAGCATTGGTTAAATAAT ATAGAAGATAATAAACTTATCTTTACAGATGATCCTGGATGGTTTTATAAAGTTGTTAATGTAGAAATAGGACAAATGGA AGTTAAGTTTAAAAGAAAGGGAGAATTTACTATTAACTTTACTTGTAGGGGATGGCAATATTCTTTAGATGGAGATGAAT TTTTAGAGATAGAAAATAATACTATGCTTTACAATGAATATGATTTAGCTAAGCCACTTCTATACTTAGAAGGTAACGGA GAAATAACTGTTACTATAAACAATAATAGTTTTTCTGTAATGTTAAGAGATTTTCTTTATATAGATTCAGAACTGGAAAT AGCATATAGAGAAAAAACGGATTGTTTAAATATAGAAACTGGAGATTATCCATTATTGGAATATGGAGAAAATAACATAA GTTTTAATGGCAATGTTAGTAAAATAGAAATTAAACCAAGATGGAGGGAGGTGTAA
Upstream 100 bases:
>100_bases ATAGATGGTAAAACTATCGCTAAAGTAGTTATAGATTCTATGGGAAATATATTAAATAGTAATGCAAATAGTAGAGCAGT TGTAAGGGGAGGTGGAACAA
Downstream 100 bases:
>100_bases TAGTTGCAATATTATAAGATAGATAATTATAACTTTGTTAAAAATGGAGATATTACTTTACAACCTATAGATGGAAAACT AAGATTAGAATTAAATACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage Pi2 Protein; Gp13 Protein; Phage-Like Protein; Phage-Related Protein; Phage Protein; Tail Protein; Phage Tail Protein; Tail Component Family Protein; Phage Tail Component
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLDLLFNLKFLKQDIGVSIVRRSPAILANKNINVINRVGADGDLYEDLGGRKDIIIPVECNFISDNPKEVFRRVKHWLNN IEDNKLIFTDDPGWFYKVVNVEIGQMEVKFKRKGEFTINFTCRGWQYSLDGDEFLEIENNTMLYNEYDLAKPLLYLEGNG EITVTINNNSFSVMLRDFLYIDSELEIAYREKTDCLNIETGDYPLLEYGENNISFNGNVSKIEIKPRWREV
Sequences:
>Translated_231_residues MLDLLFNLKFLKQDIGVSIVRRSPAILANKNINVINRVGADGDLYEDLGGRKDIIIPVECNFISDNPKEVFRRVKHWLNN IEDNKLIFTDDPGWFYKVVNVEIGQMEVKFKRKGEFTINFTCRGWQYSLDGDEFLEIENNTMLYNEYDLAKPLLYLEGNG EITVTINNNSFSVMLRDFLYIDSELEIAYREKTDCLNIETGDYPLLEYGENNISFNGNVSKIEIKPRWREV >Mature_231_residues MLDLLFNLKFLKQDIGVSIVRRSPAILANKNINVINRVGADGDLYEDLGGRKDIIIPVECNFISDNPKEVFRRVKHWLNN IEDNKLIFTDDPGWFYKVVNVEIGQMEVKFKRKGEFTINFTCRGWQYSLDGDEFLEIENNTMLYNEYDLAKPLLYLEGNG EITVTINNNSFSVMLRDFLYIDSELEIAYREKTDCLNIETGDYPLLEYGENNISFNGNVSKIEIKPRWREV
Specific function: Unknown
COG id: COG4722
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26930; Mature: 26930
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLLFNLKFLKQDIGVSIVRRSPAILANKNINVINRVGADGDLYEDLGGRKDIIIPVEC CEEEEEEHHHHHHHCCEEEEECCCEEEEECCCCEEEECCCCCCHHHHCCCCCEEEEEEEE NFISDNPKEVFRRVKHWLNNIEDNKLIFTDDPGWFYKVVNVEIGQMEVKFKRKGEFTINF EEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEEEEEEEEEEEEECCCEEEEE TCRGWQYSLDGDEFLEIENNTMLYNEYDLAKPLLYLEGNGEITVTINNNSFSVMLRDFLY EECCEEEECCCCEEEEEECCEEEEECCCCCCCEEEEECCCEEEEEECCCCEEEEEEEEEE IDSELEIAYREKTDCLNIETGDYPLLEYGENNISFNGNVSKIEIKPRWREV ECCCEEEEEECCCCEEEEECCCCCEEEECCCEEEECCCEEEEEECCCCCCC >Mature Secondary Structure MLDLLFNLKFLKQDIGVSIVRRSPAILANKNINVINRVGADGDLYEDLGGRKDIIIPVEC CEEEEEEHHHHHHHCCEEEEECCCEEEEECCCCEEEECCCCCCHHHHCCCCCEEEEEEEE NFISDNPKEVFRRVKHWLNNIEDNKLIFTDDPGWFYKVVNVEIGQMEVKFKRKGEFTINF EEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEEEEEEEEEEEEECCCEEEEE TCRGWQYSLDGDEFLEIENNTMLYNEYDLAKPLLYLEGNGEITVTINNNSFSVMLRDFLY EECCEEEECCCCEEEEEECCEEEEECCCCCCCEEEEECCCEEEEEECCCCEEEEEEEEEE IDSELEIAYREKTDCLNIETGDYPLLEYGENNISFNGNVSKIEIKPRWREV ECCCEEEEEECCCCEEEEECCCCCEEEECCCEEEECCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA