Click here to switch to the map view.

The map label for this gene is 18310099

Identifier: 18310099

GI number: 18310099

Start: 1312983

End: 1313567

Strand: Direct

Name: 18310099

Synonym: CPE1117

Alternate gene names: NA

Gene position: 1312983-1313567 (Clockwise)

Preceding gene: 18310098

Following gene: 18310100

Centisome position: 43.31

GC content: 28.89

Gene sequence:

>585_bases
GTGGTCATTGATACGATAGAAATGTCAAAAAGTCCGAGTCACTCTCTCAGTAACACAAAATTCCCTTATGAATATTTTTT
AGGAAGGAGGAGGATAATATTGGCTAAAGCATCTAAACCAGTAAATTTACTAAATAAACATTTAACTAAAGAAGAAATTG
CAAATAGAAAAGAACAGGAAGAAAAGTTAAAAGGTAGAGATAATAAAGTTTATAGAACTCCTACCACCCTTTCTAAAGAA
GGGAAAAAAGTTTATAAAAATTTAGTAGGAGAACTAAGAGAAAGCAATATATTAAACAATTTAGATATAGAAATATTATT
AACAACTGTAGATTCTATATTAAGAATGCAAGAATGTAAAGATATAATAGATAAAACTGGAGTTATTCTAACTAAGGAAG
ATGGTACATTATATAGAAATCCAGCGACTACTATTTATAAAGATTATAATGCTATATATAATAAATGCTGCATGGAGCTA
GGATTAAGTCCTTCAAGTAGAAGTAAATTAAGCTTAATTAATGTTAATGCGAAAGCAAAAGAAAATGATCCTTTGCTTGC
TGCGTTAGGTGGTGGCAACAAATAA

Upstream 100 bases:

>100_bases
ACATAATGAATATAAGAATAATAAGGCTATAGAACAAGCTAGGTTAAGAGATATATTAAAAAAATATAAGGAGACATATA
AATTATAAGATACCGGGGGA

Downstream 100 bases:

>100_bases
TGTTACTATTAGATAAAGCTATAAGATATGCTAAAGATGTAGTAGATGGAAAAGAAATTACTACTAAAGAAGTTAAACAA
CAATGTCAAATATTTTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: P27 Family Phage Terminase Small Subunit; Phage Terminase P

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVIDTIEMSKSPSHSLSNTKFPYEYFLGRRRIILAKASKPVNLLNKHLTKEEIANRKEQEEKLKGRDNKVYRTPTTLSKE
GKKVYKNLVGELRESNILNNLDIEILLTTVDSILRMQECKDIIDKTGVILTKEDGTLYRNPATTIYKDYNAIYNKCCMEL
GLSPSSRSKLSLINVNAKAKENDPLLAALGGGNK

Sequences:

>Translated_194_residues
MVIDTIEMSKSPSHSLSNTKFPYEYFLGRRRIILAKASKPVNLLNKHLTKEEIANRKEQEEKLKGRDNKVYRTPTTLSKE
GKKVYKNLVGELRESNILNNLDIEILLTTVDSILRMQECKDIIDKTGVILTKEDGTLYRNPATTIYKDYNAIYNKCCMEL
GLSPSSRSKLSLINVNAKAKENDPLLAALGGGNK
>Mature_194_residues
MVIDTIEMSKSPSHSLSNTKFPYEYFLGRRRIILAKASKPVNLLNKHLTKEEIANRKEQEEKLKGRDNKVYRTPTTLSKE
GKKVYKNLVGELRESNILNNLDIEILLTTVDSILRMQECKDIIDKTGVILTKEDGTLYRNPATTIYKDYNAIYNKCCMEL
GLSPSSRSKLSLINVNAKAKENDPLLAALGGGNK

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21921; Mature: 21921

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIDTIEMSKSPSHSLSNTKFPYEYFLGRRRIILAKASKPVNLLNKHLTKEEIANRKEQE
CEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHH
EKLKGRDNKVYRTPTTLSKEGKKVYKNLVGELRESNILNNLDIEILLTTVDSILRMQECK
HHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
DIIDKTGVILTKEDGTLYRNPATTIYKDYNAIYNKCCMELGLSPSSRSKLSLINVNAKAK
HHHHHCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
ENDPLLAALGGGNK
CCCCEEEECCCCCC
>Mature Secondary Structure
MVIDTIEMSKSPSHSLSNTKFPYEYFLGRRRIILAKASKPVNLLNKHLTKEEIANRKEQE
CEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHH
EKLKGRDNKVYRTPTTLSKEGKKVYKNLVGELRESNILNNLDIEILLTTVDSILRMQECK
HHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
DIIDKTGVILTKEDGTLYRNPATTIYKDYNAIYNKCCMELGLSPSSRSKLSLINVNAKAK
HHHHHCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
ENDPLLAALGGGNK
CCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA