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The map label for this gene is 18310098

Identifier: 18310098

GI number: 18310098

Start: 1312560

End: 1312970

Strand: Direct

Name: 18310098

Synonym: CPE1116

Alternate gene names: NA

Gene position: 1312560-1312970 (Clockwise)

Preceding gene: 18310097

Following gene: 18310099

Centisome position: 43.3

GC content: 28.22

Gene sequence:

>411_bases
ATGATATATACAATATGTGGTAAATGTGGAGATAAAATAAAGGTAGGAACTAAGTGTGAACGGTGTACTAAGGAAGCATA
TAGACAGTATAAGCATTATAGAAAAGATAAGAGAGAGCAACAGTTCTATGCTAACAATCAATGGAAAACATTATCAGAAA
TTATTAAGAGAAGATATTTAGGCATGTGCTTGAATTGTTGGGACAAAGGTATTATAGAAATGTGTACTACTACACATCAC
ATAATAGAGTTAAAAGAAGATTGGAATAGAAGGTTAGATAAAGATAACTTAATACCATTATGTACTAGATGTCATCAGAA
GATACATAATGAATATAAGAATAATAAGGCTATAGAACAAGCTAGGTTAAGAGATATATTAAAAAAATATAAGGAGACAT
ATAAATTATAA

Upstream 100 bases:

>100_bases
AAATGTTAGAAATTGGTGTTAAGTCTTATTGTATATTATAGATATTATTATCTTAAATAAAATACACGTAAATGAGTATT
AATAATAAAGGAGAATAAAG

Downstream 100 bases:

>100_bases
GATACCGGGGGAGTGGTCATTGATACGATAGAAATGTCAAAAAGTCCGAGTCACTCTCTCAGTAACACAAAATTCCCTTA
TGAATATTTTTTAGGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Gp50 Protein

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIYTICGKCGDKIKVGTKCERCTKEAYRQYKHYRKDKREQQFYANNQWKTLSEIIKRRYLGMCLNCWDKGIIEMCTTTHH
IIELKEDWNRRLDKDNLIPLCTRCHQKIHNEYKNNKAIEQARLRDILKKYKETYKL

Sequences:

>Translated_136_residues
MIYTICGKCGDKIKVGTKCERCTKEAYRQYKHYRKDKREQQFYANNQWKTLSEIIKRRYLGMCLNCWDKGIIEMCTTTHH
IIELKEDWNRRLDKDNLIPLCTRCHQKIHNEYKNNKAIEQARLRDILKKYKETYKL
>Mature_136_residues
MIYTICGKCGDKIKVGTKCERCTKEAYRQYKHYRKDKREQQFYANNQWKTLSEIIKRRYLGMCLNCWDKGIIEMCTTTHH
IIELKEDWNRRLDKDNLIPLCTRCHQKIHNEYKNNKAIEQARLRDILKKYKETYKL

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16626; Mature: 16626

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00334 MYB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYTICGKCGDKIKVGTKCERCTKEAYRQYKHYRKDKREQQFYANNQWKTLSEIIKRRYL
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GMCLNCWDKGIIEMCTTTHHIIELKEDWNRRLDKDNLIPLCTRCHQKIHNEYKNNKAIEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
ARLRDILKKYKETYKL
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIYTICGKCGDKIKVGTKCERCTKEAYRQYKHYRKDKREQQFYANNQWKTLSEIIKRRYL
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GMCLNCWDKGIIEMCTTTHHIIELKEDWNRRLDKDNLIPLCTRCHQKIHNEYKNNKAIEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
ARLRDILKKYKETYKL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA