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The map label for this gene is ymfN [H]

Identifier: 18310100

GI number: 18310100

Start: 1313567

End: 1315243

Strand: Direct

Name: ymfN [H]

Synonym: CPE1118

Alternate gene names: 18310100

Gene position: 1313567-1315243 (Clockwise)

Preceding gene: 18310099

Following gene: 18310101

Centisome position: 43.33

GC content: 27.61

Gene sequence:

>1677_bases
ATGTTACTATTAGATAAAGCTATAAGATATGCTAAAGATGTAGTAGATGGAAAAGAAATTACTACTAAAGAAGTTAAACA
ACAATGTCAAATATTTTTAGATGATTACTATGAAAAGCAATATGATGAGAGTTTTGAGTTTTGCTTTGATGAAGATAAAT
TACTTGTAATAAATAATTTATTAAAGTTATTTAATTTTGCTACAGGATTTATTAAAGGTAATGTATTAGAAGGTTTGGTT
GGTTTCCAAGCCTTATTTTTATGTGCAATTTTTGGATGGAGATATAAAAATGATAGGGACAAATTTAGATATAGAGATGT
AGTTCTATTTATTCCTCGAAAAAATGCTAAAACATTTATTATTGCTATAGTAATAATTCTTTTAATGTTAACGGAAGAAG
AGTATAGCGAATTTTATTCTATTTGCTTAGATAGAGAGTTAGCTACAGAAGTCAAAAAAGCAATGACACAAATAATAAAT
GCTAGTCCAGCTTTAACTAAATATTTTAATATAAGTAAAATTTTAAGTGGGAAAGTAACTTGTAAATTAACCAACTCTTA
TTACCAGGCAAGAACAGCTGAAGCAGACAAGAACAACGCCATAAGACCTTGTGTAGTATGCGTTGATGAAGTAGGAGCAT
TTAAAGATAATAGCAATATACAAGCTATGAGAAGTGGACAATTAAGTGTTAAAAATCCGTTAATGCTTAAGATAACAACA
GCTTATGCTAATAGTGACAGTATAATGTTGGAAGAGTTAGAGTATGTAAAGGCTGTTTTAGAAGGTACTATAGAAAATAA
AAAATTATTTGCTTTACTTTATTATGCAGATAGAGAAGAAGCATGGAGAGATAATGCTATATATAAAGCTAATCCGCTGA
GAGTTGAAGAAAACTACAAAGAAATAATGGAAAATAGGGATATAGCTAAAGTGAAAGTTAGTGAACAAGAAGAGTTTCTT
ACTAAACATTTAAATATTTTTTTAGAAACTAACGAGATTAATAAATATGTAGATATTAAAGCATGGAAGAAATGTAGAGT
AGACAAAATAGATTTTAGTGGTAAACATATTATGGTTGGAGTAGATTTATCTGTAACTACTGACCTTACAGCAGTATCTA
TAATGTATAAAGAAAATAATATACTGTATTGTCATAGCAAAGCATTTTTACCACTAGATAGCTTGGCTAAACGTAGAGAG
AGAATAGATTATAAAAGATATGCAGAACTTGGATATTGTGATATTCATGACGGTATGACGGTAAATTATACTTTGGTAGA
AGAATATATAAGAAGTTTAGAAGATAAATATAATTGCACTATAGACTATATTATAACAGATCCGATGAACGCTGGAGAAA
TGATGGATAGATTAAAACAAGATTATAATGTAATAAAATTAAGACAAACATATACTAATTTAAGTCCAGCTACTAAAGAG
TTTAGAAAAAAAATATATGATGGAGAAGTTAAATATGAAAAAAATGAACTCCTTGACTGGTGTATGAGTAATGCTATAAC
AACTAAGGGTAAAAGTGATGATGAAATGTTAGCTAAAGAAAATAAAAATAAACAAAGAATAGATATGGTTGCTGCATTGA
TATTTTGCTATACACAATTACTTAAAGATAACAATAATTATAATGCAATAGAACAACTTTTAAATATGGATTGGTAG

Upstream 100 bases:

>100_bases
TAAGTCCTTCAAGTAGAAGTAAATTAAGCTTAATTAATGTTAATGCGAAAGCAAAAGAAAATGATCCTTTGCTTGCTGCG
TTAGGTGGTGGCAACAAATA

Downstream 100 bases:

>100_bases
GTGATACAATGAAAAATATTATAAAAAAACTTAAAAATAAAATCTTATGGTCGGAGTTATTTATAATAGCTTCTATTTTT
TTATTCATTTTTACTACCTT

Product: phage-related terminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLLLDKAIRYAKDVVDGKEITTKEVKQQCQIFLDDYYEKQYDESFEFCFDEDKLLVINNLLKLFNFATGFIKGNVLEGLV
GFQALFLCAIFGWRYKNDRDKFRYRDVVLFIPRKNAKTFIIAIVIILLMLTEEEYSEFYSICLDRELATEVKKAMTQIIN
ASPALTKYFNISKILSGKVTCKLTNSYYQARTAEADKNNAIRPCVVCVDEVGAFKDNSNIQAMRSGQLSVKNPLMLKITT
AYANSDSIMLEELEYVKAVLEGTIENKKLFALLYYADREEAWRDNAIYKANPLRVEENYKEIMENRDIAKVKVSEQEEFL
TKHLNIFLETNEINKYVDIKAWKKCRVDKIDFSGKHIMVGVDLSVTTDLTAVSIMYKENNILYCHSKAFLPLDSLAKRRE
RIDYKRYAELGYCDIHDGMTVNYTLVEEYIRSLEDKYNCTIDYIITDPMNAGEMMDRLKQDYNVIKLRQTYTNLSPATKE
FRKKIYDGEVKYEKNELLDWCMSNAITTKGKSDDEMLAKENKNKQRIDMVAALIFCYTQLLKDNNNYNAIEQLLNMDW

Sequences:

>Translated_558_residues
MLLLDKAIRYAKDVVDGKEITTKEVKQQCQIFLDDYYEKQYDESFEFCFDEDKLLVINNLLKLFNFATGFIKGNVLEGLV
GFQALFLCAIFGWRYKNDRDKFRYRDVVLFIPRKNAKTFIIAIVIILLMLTEEEYSEFYSICLDRELATEVKKAMTQIIN
ASPALTKYFNISKILSGKVTCKLTNSYYQARTAEADKNNAIRPCVVCVDEVGAFKDNSNIQAMRSGQLSVKNPLMLKITT
AYANSDSIMLEELEYVKAVLEGTIENKKLFALLYYADREEAWRDNAIYKANPLRVEENYKEIMENRDIAKVKVSEQEEFL
TKHLNIFLETNEINKYVDIKAWKKCRVDKIDFSGKHIMVGVDLSVTTDLTAVSIMYKENNILYCHSKAFLPLDSLAKRRE
RIDYKRYAELGYCDIHDGMTVNYTLVEEYIRSLEDKYNCTIDYIITDPMNAGEMMDRLKQDYNVIKLRQTYTNLSPATKE
FRKKIYDGEVKYEKNELLDWCMSNAITTKGKSDDEMLAKENKNKQRIDMVAALIFCYTQLLKDNNNYNAIEQLLNMDW
>Mature_558_residues
MLLLDKAIRYAKDVVDGKEITTKEVKQQCQIFLDDYYEKQYDESFEFCFDEDKLLVINNLLKLFNFATGFIKGNVLEGLV
GFQALFLCAIFGWRYKNDRDKFRYRDVVLFIPRKNAKTFIIAIVIILLMLTEEEYSEFYSICLDRELATEVKKAMTQIIN
ASPALTKYFNISKILSGKVTCKLTNSYYQARTAEADKNNAIRPCVVCVDEVGAFKDNSNIQAMRSGQLSVKNPLMLKITT
AYANSDSIMLEELEYVKAVLEGTIENKKLFALLYYADREEAWRDNAIYKANPLRVEENYKEIMENRDIAKVKVSEQEEFL
TKHLNIFLETNEINKYVDIKAWKKCRVDKIDFSGKHIMVGVDLSVTTDLTAVSIMYKENNILYCHSKAFLPLDSLAKRRE
RIDYKRYAELGYCDIHDGMTVNYTLVEEYIRSLEDKYNCTIDYIITDPMNAGEMMDRLKQDYNVIKLRQTYTNLSPATKE
FRKKIYDGEVKYEKNELLDWCMSNAITTKGKSDDEMLAKENKNKQRIDMVAALIFCYTQLLKDNNNYNAIEQLLNMDW

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 65094; Mature: 65094

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLDKAIRYAKDVVDGKEITTKEVKQQCQIFLDDYYEKQYDESFEFCFDEDKLLVINNL
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHH
LKLFNFATGFIKGNVLEGLVGFQALFLCAIFGWRYKNDRDKFRYRDVVLFIPRKNAKTFI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCHHH
IAIVIILLMLTEEEYSEFYSICLDRELATEVKKAMTQIINASPALTKYFNISKILSGKVT
HHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEE
CKLTNSYYQARTAEADKNNAIRPCVVCVDEVGAFKDNSNIQAMRSGQLSVKNPLMLKITT
EEEECCHHHHHCCCCCCCCCCCHHHEEHHHHCCCCCCCCCEEEECCCCEECCCEEEEEEE
AYANSDSIMLEELEYVKAVLEGTIENKKLFALLYYADREEAWRDNAIYKANPLRVEENYK
EECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHCCCCEEECCCCEEHHHHH
EIMENRDIAKVKVSEQEEFLTKHLNIFLETNEINKYVDIKAWKKCRVDKIDFSGKHIMVG
HHHCCCCEEEEEECHHHHHHHHHHEEEEEECCCCCEEEHHHHHHCCCCEECCCCCEEEEE
VDLSVTTDLTAVSIMYKENNILYCHSKAFLPLDSLAKRRERIDYKRYAELGYCDIHDGMT
EEEEEECCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCEEECCCCE
VNYTLVEEYIRSLEDKYNCTIDYIITDPMNAGEMMDRLKQDYNVIKLRQTYTNLSPATKE
EEHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEHHHCCCCHHHHH
FRKKIYDGEVKYEKNELLDWCMSNAITTKGKSDDEMLAKENKNKQRIDMVAALIFCYTQL
HHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
LKDNNNYNAIEQLLNMDW
HHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MLLLDKAIRYAKDVVDGKEITTKEVKQQCQIFLDDYYEKQYDESFEFCFDEDKLLVINNL
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHH
LKLFNFATGFIKGNVLEGLVGFQALFLCAIFGWRYKNDRDKFRYRDVVLFIPRKNAKTFI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCHHH
IAIVIILLMLTEEEYSEFYSICLDRELATEVKKAMTQIINASPALTKYFNISKILSGKVT
HHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEE
CKLTNSYYQARTAEADKNNAIRPCVVCVDEVGAFKDNSNIQAMRSGQLSVKNPLMLKITT
EEEECCHHHHHCCCCCCCCCCCHHHEEHHHHCCCCCCCCCEEEECCCCEECCCEEEEEEE
AYANSDSIMLEELEYVKAVLEGTIENKKLFALLYYADREEAWRDNAIYKANPLRVEENYK
EECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHCCCCEEECCCCEEHHHHH
EIMENRDIAKVKVSEQEEFLTKHLNIFLETNEINKYVDIKAWKKCRVDKIDFSGKHIMVG
HHHCCCCEEEEEECHHHHHHHHHHEEEEEECCCCCEEEHHHHHHCCCCEECCCCCEEEEE
VDLSVTTDLTAVSIMYKENNILYCHSKAFLPLDSLAKRRERIDYKRYAELGYCDIHDGMT
EEEEEECCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCEEECCCCE
VNYTLVEEYIRSLEDKYNCTIDYIITDPMNAGEMMDRLKQDYNVIKLRQTYTNLSPATKE
EEHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEHHHCCCCHHHHH
FRKKIYDGEVKYEKNELLDWCMSNAITTKGKSDDEMLAKENKNKQRIDMVAALIFCYTQL
HHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
LKDNNNYNAIEQLLNMDW
HHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]