Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is ppcA [H]

Identifier: 18310076

GI number: 18310076

Start: 1296398

End: 1298011

Strand: Direct

Name: ppcA [H]

Synonym: CPE1094

Alternate gene names: 18310076

Gene position: 1296398-1298011 (Clockwise)

Preceding gene: 18310075

Following gene: 18310077

Centisome position: 42.77

GC content: 31.1

Gene sequence:

>1614_bases
ATGAAGATACCTTGTTCCATGATGACTCAACATCCGGATAATGTAGAAACTTATATTTCAATACAACAAGAACCAGCAGA
AGCGATAAAAGGATTAACACCACAAGATAAAGGTGGTTTAGGAATAGAAGAAGTTATGATAGATTTTGAAGGAAAGTTAA
CACCTTACCATCAAACATCACAAATAGCATTAGGATTAATTTCAAATGGTATAATTCCAGGAAAAGACGTTAGAGTAACT
CCTAGAATACCTAATGCAAATAAAGAATCAGTATTTAGACAACTTATGAGTATAATGTCTATAATTGAAACAAATGTTCA
ATCAAAAGAATTAACTGGAACTCCAGCAATCTCAGAGGTTGTTGTTCCTATGATTGAAACTGGTAAAGAAATTTCAGAGT
TTCAAGATAGAGTTAACTCAGTAGTTGATATGGGGAATAAAAACTACAAAACTAAATTAGATTTAAATAGTGTTAGAATA
ATACCTCTAGTTGAGGATGTACCTGCACTAGCAAACATAGATAGAATATTAGATGAACATTACGAAATAGAAAAGAGTAA
AGGACATATTTTAAAAGATCTTAGAATAATGATAGCAAGATCTGATACTGCTATGTCTTATGGATTAATTTCAGGAGTTT
TATCAGTTCTTATGGCAGTTGATGGAGCTTATAAATGGGGAGAAAAACATGGAGTAACTATAAGCCCAATCTTAGGTTGT
GGATCACTTCCATTTAGAGGACATTTCTCAGAAGAAAACATAGATGAAATCCTTGCTACATATAGTGGAATTAAAACTTT
CACATTTCAATCTGCTTTAAGATATGATCATGGTGAAGAAGCGACTAAACATGCAGTTAGAGAATTGAAAGAAAAAATTG
CACAATCAAAACCTAGAAACTTTAGTGAAGAAGATAAAGATTTAATGAAAGAATTCATAGGAATCTGTTCAAAACATTAT
CTTCAAACATTCTTAAAGGTAATAGATACAGTTTCATTTGTATCTGACTTTATTCCTAAGAATAGAGATAGATTAACAAA
AGCTAAAACTGGATTAGAATATAATAGAGAAGTAGCAAACTTAGACAACGTAGCGGATTTAGTTAAGGATGAAGTATTAA
AACAAGAAATTCTTAGCATAGATAACTCAAAAGAATATGCAGTTCCAAGAGCTATATCATTTACTGGAGCTATGTACACA
TTAGGAATGCCACCTGAACTTATGGGAATGGGTAGAGCATTAAACGAAATAAAAACTAAGTATGGTCAAGAAGGTATAGA
TAAACTTTTAGAAATATACCCAATCTTAAGAAAAGACTTAGCATTTGCTGCTAGATTTGCAAATGGAGGAGTTTCTAAGA
AGATAATAGATGAAGAGGCTAGACAAGAATATAAAGAAGACATGAAATATGTAAATGAAATTCTTAACCTTGGATTGGAT
TATGATTTCTTAAACGAAAATGAATTCTATCATACTTTACTTAAAACTACAAAACCTATAATAATGCACTTAATGGGACT
TGAGGAAAATGTAATGCGTAACAGCACAGAAGAACTTAAAATCCTAAATGAGTGGATAGTAAGAATGGGTAAAGTAAGAG
GAAGTATAGGCTAA

Upstream 100 bases:

>100_bases
AATTGCATTTTTATTTTAAAAACACTTGATTTTAATAAATTGTTGCAATATAATTAACTTATAAATTTCATTTTTTTTAA
AACGAAAAGGGGGACTTATT

Downstream 100 bases:

>100_bases
AATATATTTGGTATAAATTAGATATATGGTAATTTATATAATTATACTATAACAAAAATGCCAATAAACATGAATTGAGG
CCAATAAATAATATTGATGA

Product: phosphoenolpyruvate carboxylase

Products: NA

Alternate protein names: PEPC; PEPCase [H]

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MKIPCSMMTQHPDNVETYISIQQEPAEAIKGLTPQDKGGLGIEEVMIDFEGKLTPYHQTSQIALGLISNGIIPGKDVRVT
PRIPNANKESVFRQLMSIMSIIETNVQSKELTGTPAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRI
IPLVEDVPALANIDRILDEHYEIEKSKGHILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGC
GSLPFRGHFSEENIDEILATYSGIKTFTFQSALRYDHGEEATKHAVRELKEKIAQSKPRNFSEEDKDLMKEFIGICSKHY
LQTFLKVIDTVSFVSDFIPKNRDRLTKAKTGLEYNREVANLDNVADLVKDEVLKQEILSIDNSKEYAVPRAISFTGAMYT
LGMPPELMGMGRALNEIKTKYGQEGIDKLLEIYPILRKDLAFAARFANGGVSKKIIDEEARQEYKEDMKYVNEILNLGLD
YDFLNENEFYHTLLKTTKPIIMHLMGLEENVMRNSTEELKILNEWIVRMGKVRGSIG

Sequences:

>Translated_537_residues
MKIPCSMMTQHPDNVETYISIQQEPAEAIKGLTPQDKGGLGIEEVMIDFEGKLTPYHQTSQIALGLISNGIIPGKDVRVT
PRIPNANKESVFRQLMSIMSIIETNVQSKELTGTPAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRI
IPLVEDVPALANIDRILDEHYEIEKSKGHILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGC
GSLPFRGHFSEENIDEILATYSGIKTFTFQSALRYDHGEEATKHAVRELKEKIAQSKPRNFSEEDKDLMKEFIGICSKHY
LQTFLKVIDTVSFVSDFIPKNRDRLTKAKTGLEYNREVANLDNVADLVKDEVLKQEILSIDNSKEYAVPRAISFTGAMYT
LGMPPELMGMGRALNEIKTKYGQEGIDKLLEIYPILRKDLAFAARFANGGVSKKIIDEEARQEYKEDMKYVNEILNLGLD
YDFLNENEFYHTLLKTTKPIIMHLMGLEENVMRNSTEELKILNEWIVRMGKVRGSIG
>Mature_537_residues
MKIPCSMMTQHPDNVETYISIQQEPAEAIKGLTPQDKGGLGIEEVMIDFEGKLTPYHQTSQIALGLISNGIIPGKDVRVT
PRIPNANKESVFRQLMSIMSIIETNVQSKELTGTPAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRI
IPLVEDVPALANIDRILDEHYEIEKSKGHILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGC
GSLPFRGHFSEENIDEILATYSGIKTFTFQSALRYDHGEEATKHAVRELKEKIAQSKPRNFSEEDKDLMKEFIGICSKHY
LQTFLKVIDTVSFVSDFIPKNRDRLTKAKTGLEYNREVANLDNVADLVKDEVLKQEILSIDNSKEYAVPRAISFTGAMYT
LGMPPELMGMGRALNEIKTKYGQEGIDKLLEIYPILRKDLAFAARFANGGVSKKIIDEEARQEYKEDMKYVNEILNLGLD
YDFLNENEFYHTLLKTTKPIIMHLMGLEENVMRNSTEELKILNEWIVRMGKVRGSIG

Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]

COG id: COG1892

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PEPCase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021135
- InterPro:   IPR007566
- InterPro:   IPR015813 [H]

Pfam domain/function: PF00311 PEPcase [H]

EC number: =4.1.1.31 [H]

Molecular weight: Translated: 60495; Mature: 60495

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPCSMMTQHPDNVETYISIQQEPAEAIKGLTPQDKGGLGIEEVMIDFEGKLTPYHQTS
CCCCHHHHHCCCCCCEEHEEECCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHH
QIALGLISNGIIPGKDVRVTPRIPNANKESVFRQLMSIMSIIETNVQSKELTGTPAISEV
HHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEH
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEHHCCHHHHHHHHHHHHH
YEIEKSKGHILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGC
HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEHHHCC
GSLPFRGHFSEENIDEILATYSGIKTFTFQSALRYDHGEEATKHAVRELKEKIAQSKPRN
CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
FSEEDKDLMKEFIGICSKHYLQTFLKVIDTVSFVSDFIPKNRDRLTKAKTGLEYNREVAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
LDNVADLVKDEVLKQEILSIDNSKEYAVPRAISFTGAMYTLGMPPELMGMGRALNEIKTK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEECCCCHHHHHHHHHHHHHHHH
YGQEGIDKLLEIYPILRKDLAFAARFANGGVSKKIIDEEARQEYKEDMKYVNEILNLGLD
HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YDFLNENEFYHTLLKTTKPIIMHLMGLEENVMRNSTEELKILNEWIVRMGKVRGSIG
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIPCSMMTQHPDNVETYISIQQEPAEAIKGLTPQDKGGLGIEEVMIDFEGKLTPYHQTS
CCCCHHHHHCCCCCCEEHEEECCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHH
QIALGLISNGIIPGKDVRVTPRIPNANKESVFRQLMSIMSIIETNVQSKELTGTPAISEV
HHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEH
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEHHCCHHHHHHHHHHHHH
YEIEKSKGHILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGC
HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEHHHCC
GSLPFRGHFSEENIDEILATYSGIKTFTFQSALRYDHGEEATKHAVRELKEKIAQSKPRN
CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
FSEEDKDLMKEFIGICSKHYLQTFLKVIDTVSFVSDFIPKNRDRLTKAKTGLEYNREVAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
LDNVADLVKDEVLKQEILSIDNSKEYAVPRAISFTGAMYTLGMPPELMGMGRALNEIKTK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEECCCCHHHHHHHHHHHHHHHH
YGQEGIDKLLEIYPILRKDLAFAARFANGGVSKKIIDEEARQEYKEDMKYVNEILNLGLD
HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YDFLNENEFYHTLLKTTKPIIMHLMGLEENVMRNSTEELKILNEWIVRMGKVRGSIG
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA