| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310031
Identifier: 18310031
GI number: 18310031
Start: 1254652
End: 1255818
Strand: Direct
Name: 18310031
Synonym: CPE1049
Alternate gene names: NA
Gene position: 1254652-1255818 (Clockwise)
Preceding gene: 18310030
Following gene: 18310032
Centisome position: 41.39
GC content: 23.65
Gene sequence:
>1167_bases ATGGATGATTTAATAAAAGCAATTGATAAGATTACAGAAGAGGAAATCATAAAACTAGTAATTAGTAATAAATTAAATAA GGATACTGAATATAAAAAAATAGTATTTCAGCTTAAAGAAAAAAATAAAAAGGATTTTTATCAAATAGAGAAATATACTG AAAAACAAGTTTTTCATGAAAATATAGAAAAAAAAGAACTTAAAGAGAAGGTAGAAGAATTATTTATTTCTAAATACAAG CAATTAAATGCTTTTTCTAAGGAAAGTTCTTTCGATCTTAAGGTTTCTAAAAAGGGAAAGGTATTTTTAGGAATTAAGAA AAATAATGAGGCTTTAAAAGTTTTAAAGAAGGAACATAATAGAAAGAAAAACTACATATTAGAAGAGGGAATTATTATAG AGCCTCTTATAGACTTAGGAGTTTTTACTAAAGAAGGAAAGGTTATAAACTCTAAATATGATAAATACAAGCAAATAAAT AGATTTATAGAAATAATAGATGATGAAATAAAAAAGATAGATCAAAAAGAGCTTACAATATTAGACTTTGGATGTGGTAA ATCATATTTAACATTTATATTATATTATTATTTTGTTGAAATCAAAAAGATAAAGGTTAATATGATAGGATTAGATTTAA AGGCTGATGTTATAAAGAAATGTAATGAAATAGCTAAAAAATATAATTATGAAAATTTACATTTTGAGCTTGGAGATATA AATGGATTTAAATATAATAATAAGGTAGATATGGTAATAACATTACATGCTTGTGATACAGCAACAGATTATGCTTTATA TAATGCAATAAAGTGGAATAGTAAAATGATATTCTCAGTTCCATGTTGTCAACATGAATTTAATAGTCAAATAGAAAGTG AAAAGCTTTCTATACTTACTAACTATGGAATAATTAAAGAAAGAATATCAGCACTTATGACTGATTCAGTTAGAGCTAAT CTTTTAGAGTGTGCAGGATATAAAACTCAGCTTTTAGAATTTATAGATATAGCACATTCACCTAAAAATATATTAATAAG AGCAACTAAAGGAAATGTTTCTAAGGCTAAGAAAGAAAAGTCTTTAAATGAGGTTAATAATCTTATGGATGAGTTTAATT TAAGCCCAACATTATATAAGCTTTTAAAAGATGATAACTTAATATAA
Upstream 100 bases:
>100_bases AGAAAATTTACTTAAAGACACTAGTAAAAATCAGAGATAAGAGTTTATTTAAGAAAAATGTTAAGTTTAAATTTAATAAT AGATTGTAAGGTGAGTTTTA
Downstream 100 bases:
>100_bases TTAATAAAACCTTTAATTTAAGTAAGTTTTTTATTTGATTAATATTTTAAGAAAATTATAAAATTCGTAAATAGCTTTAA AGTTAATAAGTTTTTAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MDDLIKAIDKITEEEIIKLVISNKLNKDTEYKKIVFQLKEKNKKDFYQIEKYTEKQVFHENIEKKELKEKVEELFISKYK QLNAFSKESSFDLKVSKKGKVFLGIKKNNEALKVLKKEHNRKKNYILEEGIIIEPLIDLGVFTKEGKVINSKYDKYKQIN RFIEIIDDEIKKIDQKELTILDFGCGKSYLTFILYYYFVEIKKIKVNMIGLDLKADVIKKCNEIAKKYNYENLHFELGDI NGFKYNNKVDMVITLHACDTATDYALYNAIKWNSKMIFSVPCCQHEFNSQIESEKLSILTNYGIIKERISALMTDSVRAN LLECAGYKTQLLEFIDIAHSPKNILIRATKGNVSKAKKEKSLNEVNNLMDEFNLSPTLYKLLKDDNLI
Sequences:
>Translated_388_residues MDDLIKAIDKITEEEIIKLVISNKLNKDTEYKKIVFQLKEKNKKDFYQIEKYTEKQVFHENIEKKELKEKVEELFISKYK QLNAFSKESSFDLKVSKKGKVFLGIKKNNEALKVLKKEHNRKKNYILEEGIIIEPLIDLGVFTKEGKVINSKYDKYKQIN RFIEIIDDEIKKIDQKELTILDFGCGKSYLTFILYYYFVEIKKIKVNMIGLDLKADVIKKCNEIAKKYNYENLHFELGDI NGFKYNNKVDMVITLHACDTATDYALYNAIKWNSKMIFSVPCCQHEFNSQIESEKLSILTNYGIIKERISALMTDSVRAN LLECAGYKTQLLEFIDIAHSPKNILIRATKGNVSKAKKEKSLNEVNNLMDEFNLSPTLYKLLKDDNLI >Mature_388_residues MDDLIKAIDKITEEEIIKLVISNKLNKDTEYKKIVFQLKEKNKKDFYQIEKYTEKQVFHENIEKKELKEKVEELFISKYK QLNAFSKESSFDLKVSKKGKVFLGIKKNNEALKVLKKEHNRKKNYILEEGIIIEPLIDLGVFTKEGKVINSKYDKYKQIN RFIEIIDDEIKKIDQKELTILDFGCGKSYLTFILYYYFVEIKKIKVNMIGLDLKADVIKKCNEIAKKYNYENLHFELGDI NGFKYNNKVDMVITLHACDTATDYALYNAIKWNSKMIFSVPCCQHEFNSQIESEKLSILTNYGIIKERISALMTDSVRAN LLECAGYKTQLLEFIDIAHSPKNILIRATKGNVSKAKKEKSLNEVNNLMDEFNLSPTLYKLLKDDNLI
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45353; Mature: 45353
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLIKAIDKITEEEIIKLVISNKLNKDTEYKKIVFQLKEKNKKDFYQIEKYTEKQVFHE CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NIEKKELKEKVEELFISKYKQLNAFSKESSFDLKVSKKGKVFLGIKKNNEALKVLKKEHN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHC RKKNYILEEGIIIEPLIDLGVFTKEGKVINSKYDKYKQINRFIEIIDDEIKKIDQKELTI CHHCEECCCCEEEEEHHHCCEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LDFGCGKSYLTFILYYYFVEIKKIKVNMIGLDLKADVIKKCNEIAKKYNYENLHFELGDI EEECCCHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCC NGFKYNNKVDMVITLHACDTATDYALYNAIKWNSKMIFSVPCCQHEFNSQIESEKLSILT CCEEECCEEEEEEEEEECCCHHHHHHHHHEEECCEEEEECCCHHHHHHHHHHHHHHHHHH NYGIIKERISALMTDSVRANLLECAGYKTQLLEFIDIAHSPKNILIRATKGNVSKAKKEK HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH SLNEVNNLMDEFNLSPTLYKLLKDDNLI HHHHHHHHHHHHCCCHHHHHHHHCCCCC >Mature Secondary Structure MDDLIKAIDKITEEEIIKLVISNKLNKDTEYKKIVFQLKEKNKKDFYQIEKYTEKQVFHE CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NIEKKELKEKVEELFISKYKQLNAFSKESSFDLKVSKKGKVFLGIKKNNEALKVLKKEHN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHC RKKNYILEEGIIIEPLIDLGVFTKEGKVINSKYDKYKQINRFIEIIDDEIKKIDQKELTI CHHCEECCCCEEEEEHHHCCEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LDFGCGKSYLTFILYYYFVEIKKIKVNMIGLDLKADVIKKCNEIAKKYNYENLHFELGDI EEECCCHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCC NGFKYNNKVDMVITLHACDTATDYALYNAIKWNSKMIFSVPCCQHEFNSQIESEKLSILT CCEEECCEEEEEEEEEECCCHHHHHHHHHEEECCEEEEECCCHHHHHHHHHHHHHHHHHH NYGIIKERISALMTDSVRANLLECAGYKTQLLEFIDIAHSPKNILIRATKGNVSKAKKEK HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH SLNEVNNLMDEFNLSPTLYKLLKDDNLI HHHHHHHHHHHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA