| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310030
Identifier: 18310030
GI number: 18310030
Start: 1253987
End: 1254430
Strand: Direct
Name: 18310030
Synonym: CPE1048
Alternate gene names: NA
Gene position: 1253987-1254430 (Clockwise)
Preceding gene: 18310029
Following gene: 18310031
Centisome position: 41.37
GC content: 22.52
Gene sequence:
>444_bases ATGATTTTGGGGAATTATATACTAGACACTAATGTTATTATAAAACTTTGGAATAAAGAAGAAACTATATTTAATGATAT TTTAAAGGGAAATGAAATTATAATTATAGATGAAATACTTAAGGAGCTAGCAAAAAAAGAAAGAATGTTATTTAAGGGTG AATTAATAATGTCAGAGCGTTTTATGAAGTTAATTCCTTATAGAATTGAATTACATAATATAATGGCAGAAAATTTTATT AAAGAGATAAATTTTGATCATATAAAAGGTGAATTTTATTATTATAATGGAAAAAAGATAAGCAAAAATGACTTGTTACT TATAGTAGTTTTGAAAGAAAAAGGTGAATTTTCTTTGGTTACAGAGGATTTCAATTTAACTTATATTGCTAAAGAGTTAT TAGGAGAAAAGAGAGTTCTAAATATAAAAGATATTCTAATGTAA
Upstream 100 bases:
>100_bases CATTTATTTTAAATATAATATTTTCATTAAATTAATATTAAAGTTTATTTGTTAGCTATATATTTTTTATATAATATCTG TAAGCTTTTTTTTAGAGGTG
Downstream 100 bases:
>100_bases ATTATAAGCTCATATTTGATATATATTTAAATCTTATGTATTATATTATATAGCAAGTTAAGTTTAATATTACTTTAACT TTAATCTATGATGGACACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MILGNYILDTNVIIKLWNKEETIFNDILKGNEIIIIDEILKELAKKERMLFKGELIMSERFMKLIPYRIELHNIMAENFI KEINFDHIKGEFYYYNGKKISKNDLLLIVVLKEKGEFSLVTEDFNLTYIAKELLGEKRVLNIKDILM
Sequences:
>Translated_147_residues MILGNYILDTNVIIKLWNKEETIFNDILKGNEIIIIDEILKELAKKERMLFKGELIMSERFMKLIPYRIELHNIMAENFI KEINFDHIKGEFYYYNGKKISKNDLLLIVVLKEKGEFSLVTEDFNLTYIAKELLGEKRVLNIKDILM >Mature_147_residues MILGNYILDTNVIIKLWNKEETIFNDILKGNEIIIIDEILKELAKKERMLFKGELIMSERFMKLIPYRIELHNIMAENFI KEINFDHIKGEFYYYNGKKISKNDLLLIVVLKEKGEFSLVTEDFNLTYIAKELLGEKRVLNIKDILM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17461; Mature: 17461
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILGNYILDTNVIIKLWNKEETIFNDILKGNEIIIIDEILKELAKKERMLFKGELIMSER CEECCEEECCEEEEEEECCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH FMKLIPYRIELHNIMAENFIKEINFDHIKGEFYYYNGKKISKNDLLLIVVLKEKGEFSLV HHHHCCCHHHHHHHHHHHHHHHCCCCEECCEEEEECCEEECCCCEEEEEEEECCCCEEEE TEDFNLTYIAKELLGEKRVLNIKDILM EECCCHHHHHHHHCCCCEEECHHHHCC >Mature Secondary Structure MILGNYILDTNVIIKLWNKEETIFNDILKGNEIIIIDEILKELAKKERMLFKGELIMSER CEECCEEECCEEEEEEECCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH FMKLIPYRIELHNIMAENFIKEINFDHIKGEFYYYNGKKISKNDLLLIVVLKEKGEFSLV HHHHCCCHHHHHHHHHHHHHHHCCCCEECCEEEEECCEEECCCCEEEEEEEECCCCEEEE TEDFNLTYIAKELLGEKRVLNIKDILM EECCCHHHHHHHHCCCCEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA