Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309901

Identifier: 18309901

GI number: 18309901

Start: 1119814

End: 1120536

Strand: Direct

Name: 18309901

Synonym: CPE0919

Alternate gene names: NA

Gene position: 1119814-1120536 (Clockwise)

Preceding gene: 18309900

Following gene: 18309903

Centisome position: 36.94

GC content: 25.03

Gene sequence:

>723_bases
ATGAAAGATAGAAAAGCTTCAAAGTACCATAGTAGAAGTTCAAGAGTATTTGCACCAGTTCATATTAATTCAAAGGGAGT
TATAGACTATAAACTTCCTTTATGTGATTTAATGGATAGTATTCTTAGCAAAAAGAGTTTTAATACAAGTGTAATAACAG
AAACATTAGATGGAAATCAATATTATTATGATTATGATTTTGATGGAAAGAACATTATAGTATCTAAAAGCCAGATAATT
AAAGATTCGCCTGGACTAAAGTTAATTGAGAGATATAAAGGGAATTACTTAGGAAAAGAATTATATAATGACTTAGTTGT
TTTAGTATTATATAAGGATGATAAAAAGGTTACAGACACTATCTCTTACAAAAAAGATTTAGGTTTAAATGTTGATATGG
TTATAGAGGTAGGGAGTTATTTTTATAGACTACCATTATGTGAGTTTATAGACAATATTATAAGGAAAACTCCAGATATT
TTAAATTTTATATATTTTGGATTTGAAGGTGATATGTATTATATTACTCTTGAGTTTGATGGAAAAGATATAAATTACAT
AAAATATAGTGTTAATAATTCTAAGCTAGATGAAATTGAAAAAGCTATAGGTAATAGATTGGTTAAAGAATTTAGTGGTC
ATAATAATATTATTCTTAGTTTATATGATGATAATACTCGTGTAAAAGATATTGTTGCTTATAGTAGTAAGTTTTTATAT
TGA

Upstream 100 bases:

>100_bases
AATAAAAAAGTTTCATAAATTATATATAAGATTTAAATGATATATATTCCAATAAATATTCATATAATTTTACTATAGAT
TATTAATAAAAGGTGAATTT

Downstream 100 bases:

>100_bases
ATATTATAAGTAAGCAAAGAATTTATGGTGATATTTTAAAAGGATGGGTTATTGAAGAGTATAAAAATAAATGATTATAT
TTTAAGGTTTGAGAATCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQYYYDYDFDGKNIIVSKSQII
KDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDTISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDI
LNFIYFGFEGDMYYITLEFDGKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY

Sequences:

>Translated_240_residues
MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQYYYDYDFDGKNIIVSKSQII
KDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDTISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDI
LNFIYFGFEGDMYYITLEFDGKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY
>Mature_240_residues
MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQYYYDYDFDGKNIIVSKSQII
KDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDTISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDI
LNFIYFGFEGDMYYITLEFDGKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27890; Mature: 27890

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQ
CCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCE
YYYDYDFDGKNIIVSKSQIIKDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDT
EEEEEECCCCEEEEECHHHHCCCCCHHHHHHHCCCCCHHHHCCCEEEEEEEECCCCHHHH
ISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDILNFIYFGFEGDMYYITLEFD
HHHHHHCCCCEEEEEEHHHHHHHCCHHHHHHHHHHCCHHHHEEEEEEECCCEEEEEEEEC
GKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQ
CCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCE
YYYDYDFDGKNIIVSKSQIIKDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDT
EEEEEECCCCEEEEECHHHHCCCCCHHHHHHHCCCCCHHHHCCCEEEEEEEECCCCHHHH
ISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDILNFIYFGFEGDMYYITLEFD
HHHHHHCCCCEEEEEEHHHHHHHCCHHHHHHHHHHCCHHHHEEEEEEECCCEEEEEEEEC
GKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA