| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309901
Identifier: 18309901
GI number: 18309901
Start: 1119814
End: 1120536
Strand: Direct
Name: 18309901
Synonym: CPE0919
Alternate gene names: NA
Gene position: 1119814-1120536 (Clockwise)
Preceding gene: 18309900
Following gene: 18309903
Centisome position: 36.94
GC content: 25.03
Gene sequence:
>723_bases ATGAAAGATAGAAAAGCTTCAAAGTACCATAGTAGAAGTTCAAGAGTATTTGCACCAGTTCATATTAATTCAAAGGGAGT TATAGACTATAAACTTCCTTTATGTGATTTAATGGATAGTATTCTTAGCAAAAAGAGTTTTAATACAAGTGTAATAACAG AAACATTAGATGGAAATCAATATTATTATGATTATGATTTTGATGGAAAGAACATTATAGTATCTAAAAGCCAGATAATT AAAGATTCGCCTGGACTAAAGTTAATTGAGAGATATAAAGGGAATTACTTAGGAAAAGAATTATATAATGACTTAGTTGT TTTAGTATTATATAAGGATGATAAAAAGGTTACAGACACTATCTCTTACAAAAAAGATTTAGGTTTAAATGTTGATATGG TTATAGAGGTAGGGAGTTATTTTTATAGACTACCATTATGTGAGTTTATAGACAATATTATAAGGAAAACTCCAGATATT TTAAATTTTATATATTTTGGATTTGAAGGTGATATGTATTATATTACTCTTGAGTTTGATGGAAAAGATATAAATTACAT AAAATATAGTGTTAATAATTCTAAGCTAGATGAAATTGAAAAAGCTATAGGTAATAGATTGGTTAAAGAATTTAGTGGTC ATAATAATATTATTCTTAGTTTATATGATGATAATACTCGTGTAAAAGATATTGTTGCTTATAGTAGTAAGTTTTTATAT TGA
Upstream 100 bases:
>100_bases AATAAAAAAGTTTCATAAATTATATATAAGATTTAAATGATATATATTCCAATAAATATTCATATAATTTTACTATAGAT TATTAATAAAAGGTGAATTT
Downstream 100 bases:
>100_bases ATATTATAAGTAAGCAAAGAATTTATGGTGATATTTTAAAAGGATGGGTTATTGAAGAGTATAAAAATAAATGATTATAT TTTAAGGTTTGAGAATCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQYYYDYDFDGKNIIVSKSQII KDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDTISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDI LNFIYFGFEGDMYYITLEFDGKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY
Sequences:
>Translated_240_residues MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQYYYDYDFDGKNIIVSKSQII KDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDTISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDI LNFIYFGFEGDMYYITLEFDGKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY >Mature_240_residues MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQYYYDYDFDGKNIIVSKSQII KDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDTISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDI LNFIYFGFEGDMYYITLEFDGKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27890; Mature: 27890
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQ CCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCE YYYDYDFDGKNIIVSKSQIIKDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDT EEEEEECCCCEEEEECHHHHCCCCCHHHHHHHCCCCCHHHHCCCEEEEEEEECCCCHHHH ISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDILNFIYFGFEGDMYYITLEFD HHHHHHCCCCEEEEEEHHHHHHHCCHHHHHHHHHHCCHHHHEEEEEEECCCEEEEEEEEC GKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKDRKASKYHSRSSRVFAPVHINSKGVIDYKLPLCDLMDSILSKKSFNTSVITETLDGNQ CCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCE YYYDYDFDGKNIIVSKSQIIKDSPGLKLIERYKGNYLGKELYNDLVVLVLYKDDKKVTDT EEEEEECCCCEEEEECHHHHCCCCCHHHHHHHCCCCCHHHHCCCEEEEEEEECCCCHHHH ISYKKDLGLNVDMVIEVGSYFYRLPLCEFIDNIIRKTPDILNFIYFGFEGDMYYITLEFD HHHHHHCCCCEEEEEEHHHHHHHCCHHHHHHHHHHCCHHHHEEEEEEECCCEEEEEEEEC GKDINYIKYSVNNSKLDEIEKAIGNRLVKEFSGHNNIILSLYDDNTRVKDIVAYSSKFLY CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA