Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309900

Identifier: 18309900

GI number: 18309900

Start: 1119215

End: 1119619

Strand: Direct

Name: 18309900

Synonym: CPE0918

Alternate gene names: NA

Gene position: 1119215-1119619 (Clockwise)

Preceding gene: 18309899

Following gene: 18309901

Centisome position: 36.92

GC content: 29.14

Gene sequence:

>405_bases
ATGGGAGCATTAATAAGTGCAGTAGATTTTAACTTAAACTGCAAAGGATGCTTTAATCAACATTTAAAGGATTTACCAAA
CATAGAGATGGATTCAGAAGATATATTAGATAAAGTGACAAATGATCCTTTTAATGAAGGAATTATACTTGCAGGACTTG
AATGGTCACTTCAACCTAAGGAGTTAAGGGAAATGGTTAATTCGGCAAGGAAGAGAAAACTTAAGGTTATAGTTTATTCT
GGACTAAGTGAAGAAGAATTTAAGAAAAAATTCCCTGATATATATGGTTTAAAAGGAGACATGTACTTTAAGTTTGGAAA
GTATGATGAAAAATTAAAGGTGAATAATAATATTCAATATGATGTTAAGTTAGCCACATCAAATCAAAAGATATTAAAGA
AATAA

Upstream 100 bases:

>100_bases
ATGATGGTAAAAAATCAGAGTTTAAGGATAGAAATCAGTTAAGCCTATGATTATAAAAACAAAGGGCATTGTTCATGAGA
GAGTAGAGGATGCGCCTTTT

Downstream 100 bases:

>100_bases
AGGTAAAGAACTGTACCAAGTATTATATAGGTTTTTATACTTTGGTATAGTTCTTTTATTTTGTAAAAATTATTTAGAAT
AATATTGTTAACTAAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MGALISAVDFNLNCKGCFNQHLKDLPNIEMDSEDILDKVTNDPFNEGIILAGLEWSLQPKELREMVNSARKRKLKVIVYS
GLSEEEFKKKFPDIYGLKGDMYFKFGKYDEKLKVNNNIQYDVKLATSNQKILKK

Sequences:

>Translated_134_residues
MGALISAVDFNLNCKGCFNQHLKDLPNIEMDSEDILDKVTNDPFNEGIILAGLEWSLQPKELREMVNSARKRKLKVIVYS
GLSEEEFKKKFPDIYGLKGDMYFKFGKYDEKLKVNNNIQYDVKLATSNQKILKK
>Mature_133_residues
GALISAVDFNLNCKGCFNQHLKDLPNIEMDSEDILDKVTNDPFNEGIILAGLEWSLQPKELREMVNSARKRKLKVIVYSG
LSEEEFKKKFPDIYGLKGDMYFKFGKYDEKLKVNNNIQYDVKLATSNQKILKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15454; Mature: 15323

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALISAVDFNLNCKGCFNQHLKDLPNIEMDSEDILDKVTNDPFNEGIILAGLEWSLQPK
CCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHH
ELREMVNSARKRKLKVIVYSGLSEEEFKKKFPDIYGLKGDMYFKFGKYDEKLKVNNNIQY
HHHHHHHHHHHCEEEEEEECCCCHHHHHHHCCHHCCCCCCEEEEECCCCCEEEECCCEEE
DVKLATSNQKILKK
EEEEECCCHHHHCC
>Mature Secondary Structure 
GALISAVDFNLNCKGCFNQHLKDLPNIEMDSEDILDKVTNDPFNEGIILAGLEWSLQPK
CCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHH
ELREMVNSARKRKLKVIVYSGLSEEEFKKKFPDIYGLKGDMYFKFGKYDEKLKVNNNIQY
HHHHHHHHHHHCEEEEEEECCCCHHHHHHHCCHHCCCCCCEEEEECCCCCEEEECCCEEE
DVKLATSNQKILKK
EEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA