| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309897
Identifier: 18309897
GI number: 18309897
Start: 1115535
End: 1116155
Strand: Direct
Name: 18309897
Synonym: CPE0915
Alternate gene names: NA
Gene position: 1115535-1116155 (Clockwise)
Preceding gene: 18309896
Following gene: 18309898
Centisome position: 36.8
GC content: 34.3
Gene sequence:
>621_bases ATGAAAGTATTATTAGTTAATGGAAGTCCCAATAAAGAGGGATGTACTTATACAGCATTAAAGGAAGTAAGTAAAACTCT AGAGGAAAATGGAATAGATACTGAAATATTTCAAGTGGGGAATAAGCCTATAGGTGGATGCATAGGATGTGGCTCTTGTA AAAAAACAGGGGAATGTTTTATGAAGGATGGTGTAAATGAATTTGTGGAAAAAGCTAAGGATGCAGATGGATTTGTATTT GGTTCACCAGTTTATTATGCAGCAGCTTCAGGTTCAATAACTTCATTTTTAGATAGAGCATTTTATTCTGGGGGTAAACA TATGGCATTTAAGCCAGGGGCAGTTATATGCAGTGCAAGACGTGCTGGGACAACCTCTACTTTAGATCAATTAAGTAAGT ATCTTACAATATGCAATATGCCAGTTGTAAGTTCACAATACTGGAATATGGTTCATGGAAATACTCCAGAGAAGGTTAAA AAGGACCTAGAAGGTATGCAAACAATGAGAGTGCTAGGAAGAAATATGGCATGGCTTATTAAGTGTATAGAATTAGGTAA GAATAATAATATTCTTAAACCAGAGTTAGAAGAAAGAGAAAGAACTAATTTTATTAGATAA
Upstream 100 bases:
>100_bases TAAATTTAAGGATAGTTAATTTTTAAAGGATAGAAATAGTAAGAATTAATGAGAAGGATTTATAATATAATAAGGTGGTT ATAATTAGGAGGTACAAAAA
Downstream 100 bases:
>100_bases TATGAAGATTTAAAAATAGTTTTTATAAATAGACTCTGTTAGTTAATAGAGAAAATAAGTGAAATATATCAAAGTTAATT TTAATCTTTGATATATTTCA
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKVLLVNGSPNKEGCTYTALKEVSKTLEENGIDTEIFQVGNKPIGGCIGCGSCKKTGECFMKDGVNEFVEKAKDADGFVF GSPVYYAAASGSITSFLDRAFYSGGKHMAFKPGAVICSARRAGTTSTLDQLSKYLTICNMPVVSSQYWNMVHGNTPEKVK KDLEGMQTMRVLGRNMAWLIKCIELGKNNNILKPELEERERTNFIR
Sequences:
>Translated_206_residues MKVLLVNGSPNKEGCTYTALKEVSKTLEENGIDTEIFQVGNKPIGGCIGCGSCKKTGECFMKDGVNEFVEKAKDADGFVF GSPVYYAAASGSITSFLDRAFYSGGKHMAFKPGAVICSARRAGTTSTLDQLSKYLTICNMPVVSSQYWNMVHGNTPEKVK KDLEGMQTMRVLGRNMAWLIKCIELGKNNNILKPELEERERTNFIR >Mature_206_residues MKVLLVNGSPNKEGCTYTALKEVSKTLEENGIDTEIFQVGNKPIGGCIGCGSCKKTGECFMKDGVNEFVEKAKDADGFVF GSPVYYAAASGSITSFLDRAFYSGGKHMAFKPGAVICSARRAGTTSTLDQLSKYLTICNMPVVSSQYWNMVHGNTPEKVK KDLEGMQTMRVLGRNMAWLIKCIELGKNNNILKPELEERERTNFIR
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 22660; Mature: 22660
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLLVNGSPNKEGCTYTALKEVSKTLEENGIDTEIFQVGNKPIGGCIGCGSCKKTGECF CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEECCCCCHHHHHH MKDGVNEFVEKAKDADGFVFGSPVYYAAASGSITSFLDRAFYSGGKHMAFKPGAVICSAR HHHHHHHHHHHHCCCCCEEECCCCEEEECCCCHHHHHHHHHHCCCCEEEECCCCEEECCC RAGTTSTLDQLSKYLTICNMPVVSSQYWNMVHGNTPEKVKKDLEGMQTMRVLGRNMAWLI CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH KCIELGKNNNILKPELEERERTNFIR HHHHHCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MKVLLVNGSPNKEGCTYTALKEVSKTLEENGIDTEIFQVGNKPIGGCIGCGSCKKTGECF CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEECCCCCHHHHHH MKDGVNEFVEKAKDADGFVFGSPVYYAAASGSITSFLDRAFYSGGKHMAFKPGAVICSAR HHHHHHHHHHHHCCCCCEEECCCCEEEECCCCHHHHHHHHHHCCCCEEEECCCCEEECCC RAGTTSTLDQLSKYLTICNMPVVSSQYWNMVHGNTPEKVKKDLEGMQTMRVLGRNMAWLI CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH KCIELGKNNNILKPELEERERTNFIR HHHHHCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]