| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309898
Identifier: 18309898
GI number: 18309898
Start: 1116597
End: 1117022
Strand: Direct
Name: 18309898
Synonym: CPE0916
Alternate gene names: NA
Gene position: 1116597-1117022 (Clockwise)
Preceding gene: 18309897
Following gene: 18309899
Centisome position: 36.83
GC content: 31.22
Gene sequence:
>426_bases ATGGAATCAAAGGAAATGAGATTAGCTAAAAAAGCAAAAAAACTTATAGATGAGTTTGAAAGAGTTCAATCGGTTCTTCT AAGTGGAGAATTATCTGATCAAGAAGTGGAAATAAGAGATGATGGAGCTACTATTGTTCTTAAAAATATAATGCCAGGAT ATAGTGGAGAAGCTATGTTTAAGTTAACTCATATATCTGATGTGGTTAAATCTTACATTGATGATATGGATGAAGAAAAT GATGAAATGATTAAGAGTTACGAAGTTGAAAATACTAATTGGCATGAAAGTTATTTGGGAGATATTTACAGAGAATCTGC TATGGAACATTTAGAAAAGGTTGAAGTAGTAGGAGATAAAGTTAGGCATACGTATAAGGAGCTTAAGAAAATAGAAGAGA AAGCTAGAGAAATAGAAGGACTATAG
Upstream 100 bases:
>100_bases AAAGGTATTTTTGAAGTTTTAGATTATATAACAAGGAAATTTATAAGTAAAAATAATACTTCTATAATGTAGATTTTAAC TAGAAAGTGGGGAACTAATT
Downstream 100 bases:
>100_bases GATTTAGTTTTTATTTGTAAAGTAAGGTTATATATTAAATAAACCTTACTTTATTTTATTTATAAATAAAATAACAATAT TAATTAAATACATATTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MESKEMRLAKKAKKLIDEFERVQSVLLSGELSDQEVEIRDDGATIVLKNIMPGYSGEAMFKLTHISDVVKSYIDDMDEEN DEMIKSYEVENTNWHESYLGDIYRESAMEHLEKVEVVGDKVRHTYKELKKIEEKAREIEGL
Sequences:
>Translated_141_residues MESKEMRLAKKAKKLIDEFERVQSVLLSGELSDQEVEIRDDGATIVLKNIMPGYSGEAMFKLTHISDVVKSYIDDMDEEN DEMIKSYEVENTNWHESYLGDIYRESAMEHLEKVEVVGDKVRHTYKELKKIEEKAREIEGL >Mature_141_residues MESKEMRLAKKAKKLIDEFERVQSVLLSGELSDQEVEIRDDGATIVLKNIMPGYSGEAMFKLTHISDVVKSYIDDMDEEN DEMIKSYEVENTNWHESYLGDIYRESAMEHLEKVEVVGDKVRHTYKELKKIEEKAREIEGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16418; Mature: 16418
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESKEMRLAKKAKKLIDEFERVQSVLLSGELSDQEVEIRDDGATIVLKNIMPGYSGEAMF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHCCCCCCCCCHHH KLTHISDVVKSYIDDMDEENDEMIKSYEVENTNWHESYLGDIYRESAMEHLEKVEVVGDK HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRHTYKELKKIEEKAREIEGL HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MESKEMRLAKKAKKLIDEFERVQSVLLSGELSDQEVEIRDDGATIVLKNIMPGYSGEAMF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHCCCCCCCCCHHH KLTHISDVVKSYIDDMDEENDEMIKSYEVENTNWHESYLGDIYRESAMEHLEKVEVVGDK HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRHTYKELKKIEEKAREIEGL HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA