| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is deaD [H]
Identifier: 18309844
GI number: 18309844
Start: 1056913
End: 1058349
Strand: Direct
Name: deaD [H]
Synonym: CPE0862
Alternate gene names: 18309844
Gene position: 1056913-1058349 (Clockwise)
Preceding gene: 18309843
Following gene: 18309845
Centisome position: 34.87
GC content: 29.85
Gene sequence:
>1437_bases ATGAAATTTAATGAATTAAATTTAAGTGAGGATATTATTAAAGCGCTTAATAATTTAGGATATAAAAATCCATCAGAGGT TCAGGAAGCTTCTATTCCAAAATTATTAAAGGGTGAAGATATAATAGTTAAATCTCAAACTGGTAGTGGTAAAACTGCAA GTTTTGGAATACCTGTTTGTGAAAAGATAAATATTGAAGAAAAAAAGGTTCAGTGTCTAGTTTTAACACCAACTAGAGAG TTAGCAATTCAAGTTAAAGATGAACTTTCTAATATAGGAAGAATAAAAAAGGTTAGATGTGCGGCTATATTTGGGAAACA ACCTTTTAATGAGCAAATTAGAGAGCTTAAACAAAGAGTACATATAGTAGTAGGAACTCCAGGAAGAGTATTTGATCATA TGGAAAGAGGAACTTTAGACTTAAGTGAAGTTAACTATGTAGTCATAGATGAAGCTGATAAAATGCTTTCAATGGGATTT ATTGATCAAATAAAGGACATATTAGGAGAATTAAGATTAAATAAAACCACTGCATTATTTTCTGCTACATTTTCTAAGGA AATAGAGGAAATATGTGAAGAGTATATGAGAAATCCTATGCTTTTAGAGGTTAAATCAAAAGTATTCAATAGGGATAGAA TAGAAGAAAGTGCAATTGAAATAGAGGAGAAAAATAAGGAGAAAGCTTTATGGAAATGCCTTTATGCTTATCATCCAGAG AGTGCTATAGTATTTTGTAATACAAGAAATAAGGTTAAGTCTGTTTATAAAATGCTTAAGGATGAGGGAATAACTTGTAA TGAGCTTCATGGCGATATGGAGCAAAAGAAGCGTATTGAGGTTATGGAAAACTTTAGAGATAAGCACTTTAAAGTTTTAG TTTGTACTGATATAGCGGCTAGAGGAATTCACGTAGATAGTATAGAACTTGTTATAAACTATGAGGTTCCAATGGAAACA GAAAGCTATGTTCATAGAATAGGAAGAACAGGTAGAGCAGGAAGAGAAGGAAAGGCTATTACCTTTGTAAATCATTATGA GAAGAAATATTTAGAGAATGTTGAAGAATATATTGGTTATGAAATAAAAAAAGTAAGTCTTCCTTCTGATGAAGAAGTTA AAGCTGGAAGAAAAATATTTAAGGAAAGTCAAAAGGTTCAATTAAAAGAGAGTAAAAAACCTAAGAAAGAAGTTCATGGT GATATAGTTAAAATACATGTTAATGGCGGAAAGAAAAAGAAAATAAGAGCCTTTGATATTGTTGGATGTTTTAGTAACTT ACCAGGTTTAACAGGAGAAGATATTGGAATAATAGATGTTCAAGATGGTTTCTCTTATGTTGATATATTAAATGGAAAAG GTGATAAAGTTTTAAAAAGCTTTAAGGAAGTTACTATAAAGGGTAAAAAAGTTAAAATACAAAAAGCAAGAAAATAA
Upstream 100 bases:
>100_bases TTCTTAGGATTTTAAAAATTAAAATTAGTAGAAAAAATGAATATATGGTATAACTATAAGAAGACTAATAAAGTTTTAAA AAAGGAGATAAAAACAATAT
Downstream 100 bases:
>100_bases AATTATTATTAATTTAATTATAAAAGTAGTTATAATGTTAAATTGTTTTGAAGTATATAATGACCATGTAATATGTGGTA AAATTAAAGTAAGATATAGT
Product: ATP-dependent RNA helicase DeaD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MKFNELNLSEDIIKALNNLGYKNPSEVQEASIPKLLKGEDIIVKSQTGSGKTASFGIPVCEKINIEEKKVQCLVLTPTRE LAIQVKDELSNIGRIKKVRCAAIFGKQPFNEQIRELKQRVHIVVGTPGRVFDHMERGTLDLSEVNYVVIDEADKMLSMGF IDQIKDILGELRLNKTTALFSATFSKEIEEICEEYMRNPMLLEVKSKVFNRDRIEESAIEIEEKNKEKALWKCLYAYHPE SAIVFCNTRNKVKSVYKMLKDEGITCNELHGDMEQKKRIEVMENFRDKHFKVLVCTDIAARGIHVDSIELVINYEVPMET ESYVHRIGRTGRAGREGKAITFVNHYEKKYLENVEEYIGYEIKKVSLPSDEEVKAGRKIFKESQKVQLKESKKPKKEVHG DIVKIHVNGGKKKKIRAFDIVGCFSNLPGLTGEDIGIIDVQDGFSYVDILNGKGDKVLKSFKEVTIKGKKVKIQKARK
Sequences:
>Translated_478_residues MKFNELNLSEDIIKALNNLGYKNPSEVQEASIPKLLKGEDIIVKSQTGSGKTASFGIPVCEKINIEEKKVQCLVLTPTRE LAIQVKDELSNIGRIKKVRCAAIFGKQPFNEQIRELKQRVHIVVGTPGRVFDHMERGTLDLSEVNYVVIDEADKMLSMGF IDQIKDILGELRLNKTTALFSATFSKEIEEICEEYMRNPMLLEVKSKVFNRDRIEESAIEIEEKNKEKALWKCLYAYHPE SAIVFCNTRNKVKSVYKMLKDEGITCNELHGDMEQKKRIEVMENFRDKHFKVLVCTDIAARGIHVDSIELVINYEVPMET ESYVHRIGRTGRAGREGKAITFVNHYEKKYLENVEEYIGYEIKKVSLPSDEEVKAGRKIFKESQKVQLKESKKPKKEVHG DIVKIHVNGGKKKKIRAFDIVGCFSNLPGLTGEDIGIIDVQDGFSYVDILNGKGDKVLKSFKEVTIKGKKVKIQKARK >Mature_478_residues MKFNELNLSEDIIKALNNLGYKNPSEVQEASIPKLLKGEDIIVKSQTGSGKTASFGIPVCEKINIEEKKVQCLVLTPTRE LAIQVKDELSNIGRIKKVRCAAIFGKQPFNEQIRELKQRVHIVVGTPGRVFDHMERGTLDLSEVNYVVIDEADKMLSMGF IDQIKDILGELRLNKTTALFSATFSKEIEEICEEYMRNPMLLEVKSKVFNRDRIEESAIEIEEKNKEKALWKCLYAYHPE SAIVFCNTRNKVKSVYKMLKDEGITCNELHGDMEQKKRIEVMENFRDKHFKVLVCTDIAARGIHVDSIELVINYEVPMET ESYVHRIGRTGRAGREGKAITFVNHYEKKYLENVEEYIGYEIKKVSLPSDEEVKAGRKIFKESQKVQLKESKKPKKEVHG DIVKIHVNGGKKKKIRAFDIVGCFSNLPGLTGEDIGIIDVQDGFSYVDILNGKGDKVLKSFKEVTIKGKKVKIQKARK
Specific function: Has a helix-destabilizing activity. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. May function in rRNA maturation and ribosome biogenesis [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=366, Percent_Identity=37.1584699453552, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI20149629, Length=428, Percent_Identity=34.1121495327103, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI4503529, Length=368, Percent_Identity=37.7717391304348, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=37.6021798365123, Blast_Score=242, Evalue=7e-64, Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=35.9897172236504, Blast_Score=239, Evalue=6e-63, Organism=Homo sapiens, GI31542656, Length=373, Percent_Identity=32.7077747989276, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI224593278, Length=377, Percent_Identity=32.0954907161804, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI13129006, Length=385, Percent_Identity=35.8441558441558, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI164664518, Length=370, Percent_Identity=31.3513513513514, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=34.6994535519126, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=34.7945205479452, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=35.0684931506849, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI169881239, Length=365, Percent_Identity=35.0684931506849, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI13514809, Length=365, Percent_Identity=35.0684931506849, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI148613856, Length=349, Percent_Identity=34.0974212034384, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI38201710, Length=349, Percent_Identity=34.0974212034384, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI4758138, Length=351, Percent_Identity=32.7635327635328, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI45446747, Length=381, Percent_Identity=32.2834645669291, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI45446743, Length=381, Percent_Identity=32.2834645669291, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI41327773, Length=395, Percent_Identity=33.1645569620253, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI262118318, Length=365, Percent_Identity=32.3287671232877, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=32.3287671232877, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=32.3287671232877, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI41327776, Length=428, Percent_Identity=30.607476635514, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=32.3287671232877, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=33.6134453781513, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI188035877, Length=366, Percent_Identity=32.5136612021858, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI222352149, Length=339, Percent_Identity=34.2182890855457, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI51094101, Length=364, Percent_Identity=30.2197802197802, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI164419743, Length=364, Percent_Identity=30.2197802197802, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI41327771, Length=402, Percent_Identity=31.0945273631841, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI55749865, Length=392, Percent_Identity=30.3571428571429, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI21040371, Length=380, Percent_Identity=28.6842105263158, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI4758112, Length=380, Percent_Identity=28.1578947368421, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI18375623, Length=380, Percent_Identity=28.1578947368421, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI256223453, Length=388, Percent_Identity=29.639175257732, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI38569503, Length=384, Percent_Identity=30.46875, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38569505, Length=368, Percent_Identity=30.9782608695652, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI13514831, Length=362, Percent_Identity=30.1104972375691, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI8922886, Length=386, Percent_Identity=31.0880829015544, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI6005743, Length=386, Percent_Identity=31.3471502590674, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI41327779, Length=368, Percent_Identity=33.4239130434783, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI164419732, Length=370, Percent_Identity=30.2702702702703, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=31.6216216216216, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=26.9326683291771, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI38327634, Length=359, Percent_Identity=29.8050139275766, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI17505907, Length=415, Percent_Identity=27.9518072289157, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI62241024, Length=356, Percent_Identity=31.4606741573034, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI256773275, Length=405, Percent_Identity=25.9259259259259, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI9966805, Length=302, Percent_Identity=32.1192052980132, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=29.2537313432836, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI154759257, Length=444, Percent_Identity=24.7747747747748, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI20336298, Length=354, Percent_Identity=27.4011299435028, Blast_Score=120, Evalue=4e-27, Organism=Escherichia coli, GI87082221, Length=386, Percent_Identity=42.7461139896373, Blast_Score=337, Evalue=1e-93, Organism=Escherichia coli, GI1787605, Length=474, Percent_Identity=35.2320675105485, Blast_Score=310, Evalue=2e-85, Organism=Escherichia coli, GI1787016, Length=384, Percent_Identity=34.8958333333333, Blast_Score=272, Evalue=3e-74, Organism=Escherichia coli, GI1790214, Length=373, Percent_Identity=32.7077747989276, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1788930, Length=356, Percent_Identity=34.5505617977528, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI48994977, Length=364, Percent_Identity=24.4505494505494, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71995724, Length=366, Percent_Identity=37.9781420765027, Blast_Score=279, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=37.7049180327869, Blast_Score=278, Evalue=3e-75, Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=37.2972972972973, Blast_Score=270, Evalue=8e-73, Organism=Caenorhabditis elegans, GI17555296, Length=358, Percent_Identity=37.7094972067039, Blast_Score=268, Evalue=4e-72, Organism=Caenorhabditis elegans, GI115532546, Length=368, Percent_Identity=34.5108695652174, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI115532548, Length=398, Percent_Identity=32.6633165829146, Blast_Score=247, Evalue=9e-66, Organism=Caenorhabditis elegans, GI17510307, Length=392, Percent_Identity=34.9489795918367, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI71995514, Length=393, Percent_Identity=34.8600508905852, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17510309, Length=392, Percent_Identity=34.9489795918367, Blast_Score=238, Evalue=7e-63, Organism=Caenorhabditis elegans, GI115533224, Length=354, Percent_Identity=35.3107344632768, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17552114, Length=373, Percent_Identity=30.5630026809651, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71999646, Length=376, Percent_Identity=32.4468085106383, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71999644, Length=376, Percent_Identity=32.4468085106383, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=34.2465753424658, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI86570094, Length=394, Percent_Identity=34.5177664974619, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17510559, Length=430, Percent_Identity=30.2325581395349, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI32565321, Length=376, Percent_Identity=31.6489361702128, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17507945, Length=341, Percent_Identity=34.3108504398827, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI71982858, Length=373, Percent_Identity=30.0268096514745, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17509811, Length=408, Percent_Identity=30.1470588235294, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI17537549, Length=353, Percent_Identity=34.5609065155807, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI193206561, Length=352, Percent_Identity=30.6818181818182, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=29.5392953929539, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17507877, Length=375, Percent_Identity=29.3333333333333, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17552642, Length=351, Percent_Identity=31.6239316239316, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17536099, Length=389, Percent_Identity=29.5629820051414, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI17536101, Length=390, Percent_Identity=29.4871794871795, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17507879, Length=375, Percent_Identity=29.6, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17536103, Length=390, Percent_Identity=29.4871794871795, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17508543, Length=416, Percent_Identity=27.8846153846154, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17505370, Length=353, Percent_Identity=28.8951841359773, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=28.4552845528455, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17507641, Length=391, Percent_Identity=28.3887468030691, Blast_Score=158, Evalue=7e-39, Organism=Caenorhabditis elegans, GI71990816, Length=371, Percent_Identity=26.9541778975741, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI32564046, Length=378, Percent_Identity=28.5714285714286, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=28.5340314136126, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17556951, Length=375, Percent_Identity=27.2, Blast_Score=144, Evalue=7e-35, Organism=Caenorhabditis elegans, GI25148291, Length=343, Percent_Identity=27.9883381924198, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI25148203, Length=421, Percent_Identity=23.2779097387173, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71997889, Length=428, Percent_Identity=24.7663551401869, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=32.8358208955224, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71987152, Length=107, Percent_Identity=43.9252336448598, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17566630, Length=333, Percent_Identity=25.5255255255255, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25145561, Length=357, Percent_Identity=24.3697478991597, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320224, Length=377, Percent_Identity=36.604774535809, Blast_Score=256, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=34.6883468834688, Blast_Score=255, Evalue=9e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=371, Percent_Identity=34.2318059299191, Blast_Score=245, Evalue=9e-66, Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=35.2112676056338, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=35.7541899441341, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=429, Percent_Identity=33.7995337995338, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6322912, Length=373, Percent_Identity=34.5844504021448, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6322323, Length=373, Percent_Identity=34.5844504021448, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6325138, Length=377, Percent_Identity=32.3607427055703, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6324778, Length=357, Percent_Identity=31.6526610644258, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=422, Percent_Identity=29.6208530805687, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6324620, Length=385, Percent_Identity=32.4675324675325, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6320119, Length=373, Percent_Identity=30.5630026809651, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=400, Percent_Identity=33.25, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=29.3628808864266, Blast_Score=186, Evalue=9e-48, Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=31.7191283292978, Blast_Score=186, Evalue=9e-48, Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=30, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6320449, Length=377, Percent_Identity=29.1777188328912, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=28.8359788359788, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=387, Percent_Identity=29.9741602067183, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6321267, Length=348, Percent_Identity=33.3333333333333, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=25.6658595641646, Blast_Score=142, Evalue=9e-35, Organism=Saccharomyces cerevisiae, GI6320173, Length=210, Percent_Identity=32.3809523809524, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=371, Percent_Identity=25.3369272237197, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6322876, Length=183, Percent_Identity=31.6939890710383, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321374, Length=418, Percent_Identity=21.2918660287081, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=37.431693989071, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI24585582, Length=387, Percent_Identity=33.3333333333333, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24582080, Length=364, Percent_Identity=35.989010989011, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24582078, Length=364, Percent_Identity=35.989010989011, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI17136248, Length=364, Percent_Identity=35.989010989011, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24582075, Length=364, Percent_Identity=35.989010989011, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24644487, Length=352, Percent_Identity=34.375, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI45551833, Length=352, Percent_Identity=34.375, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24644485, Length=352, Percent_Identity=34.375, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI281361218, Length=352, Percent_Identity=34.375, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24644481, Length=352, Percent_Identity=34.375, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24644483, Length=351, Percent_Identity=34.1880341880342, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24644479, Length=351, Percent_Identity=34.1880341880342, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=35.0282485875706, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=31.5934065934066, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=31.5934065934066, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=32.378223495702, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=33.8753387533875, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI18857967, Length=358, Percent_Identity=32.9608938547486, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=33.1460674157303, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24642151, Length=362, Percent_Identity=31.2154696132597, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI21356161, Length=379, Percent_Identity=30.8707124010554, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI21355075, Length=341, Percent_Identity=31.9648093841642, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI28575014, Length=362, Percent_Identity=31.767955801105, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI17136814, Length=374, Percent_Identity=32.8877005347594, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=31.3829787234043, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=30.3370786516854, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI20130173, Length=510, Percent_Identity=28.8235294117647, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=32.6923076923077, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24581954, Length=347, Percent_Identity=29.6829971181556, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24581952, Length=347, Percent_Identity=29.6829971181556, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24581956, Length=347, Percent_Identity=29.6829971181556, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI17647335, Length=351, Percent_Identity=29.6296296296296, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI21355559, Length=369, Percent_Identity=33.6043360433604, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI24666101, Length=346, Percent_Identity=31.5028901734104, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=28.3544303797468, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI28571808, Length=353, Percent_Identity=28.328611898017, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI28571809, Length=353, Percent_Identity=28.328611898017, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24642822, Length=392, Percent_Identity=26.7857142857143, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI28571338, Length=471, Percent_Identity=26.3269639065817, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI18859659, Length=471, Percent_Identity=26.3269639065817, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=28.8753799392097, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI19920478, Length=343, Percent_Identity=26.2390670553936, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI17136666, Length=427, Percent_Identity=27.1662763466042, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24640164, Length=376, Percent_Identity=19.9468085106383, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24664230, Length=326, Percent_Identity=22.3926380368098, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24664226, Length=326, Percent_Identity=22.3926380368098, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI62472181, Length=326, Percent_Identity=22.3926380368098, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 54505; Mature: 54505
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNELNLSEDIIKALNNLGYKNPSEVQEASIPKLLKGEDIIVKSQTGSGKTASFGIPVC CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHCCCEEEEEECCCCCCCEECCCCCC EKINIEEKKVQCLVLTPTRELAIQVKDELSNIGRIKKVRCAAIFGKQPFNEQIRELKQRV CCCCCCCCEEEEEEECCCHHHHEEEHHHHHCCCHHHHHHEEHHHCCCCHHHHHHHHHHCE HIVVGTPGRVFDHMERGTLDLSEVNYVVIDEADKMLSMGFIDQIKDILGELRLNKTTALF EEEECCCHHHHHHHHCCCEEHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHH SATFSKEIEEICEEYMRNPMLLEVKSKVFNRDRIEESAIEIEEKNKEKALWKCLYAYHPE HHHHHHHHHHHHHHHHCCCEEEEHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC SAIVFCNTRNKVKSVYKMLKDEGITCNELHGDMEQKKRIEVMENFRDKHFKVLVCTDIAA CEEEEECCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECHHH RGIHVDSIELVINYEVPMETESYVHRIGRTGRAGREGKAITFVNHYEKKYLENVEEYIGY CCEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCC EIKKVSLPSDEEVKAGRKIFKESQKVQLKESKKPKKEVHGDIVKIHVNGGKKKKIRAFDI EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCCCEEEEEEE VGCFSNLPGLTGEDIGIIDVQDGFSYVDILNGKGDKVLKSFKEVTIKGKKVKIQKARK EEHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHEECCCEEEEECCCC >Mature Secondary Structure MKFNELNLSEDIIKALNNLGYKNPSEVQEASIPKLLKGEDIIVKSQTGSGKTASFGIPVC CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHCCCEEEEEECCCCCCCEECCCCCC EKINIEEKKVQCLVLTPTRELAIQVKDELSNIGRIKKVRCAAIFGKQPFNEQIRELKQRV CCCCCCCCEEEEEEECCCHHHHEEEHHHHHCCCHHHHHHEEHHHCCCCHHHHHHHHHHCE HIVVGTPGRVFDHMERGTLDLSEVNYVVIDEADKMLSMGFIDQIKDILGELRLNKTTALF EEEECCCHHHHHHHHCCCEEHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHH SATFSKEIEEICEEYMRNPMLLEVKSKVFNRDRIEESAIEIEEKNKEKALWKCLYAYHPE HHHHHHHHHHHHHHHHCCCEEEEHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC SAIVFCNTRNKVKSVYKMLKDEGITCNELHGDMEQKKRIEVMENFRDKHFKVLVCTDIAA CEEEEECCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECHHH RGIHVDSIELVINYEVPMETESYVHRIGRTGRAGREGKAITFVNHYEKKYLENVEEYIGY CCEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCC EIKKVSLPSDEEVKAGRKIFKESQKVQLKESKKPKKEVHGDIVKIHVNGGKKKKIRAFDI EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCCCEEEEEEE VGCFSNLPGLTGEDIGIIDVQDGFSYVDILNGKGDKVLKSFKEVTIKGKKVKIQKARK EEHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHEECCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10481020 [H]