Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309845

Identifier: 18309845

GI number: 18309845

Start: 1058504

End: 1058962

Strand: Direct

Name: 18309845

Synonym: CPE0863

Alternate gene names: NA

Gene position: 1058504-1058962 (Clockwise)

Preceding gene: 18309844

Following gene: 18309846

Centisome position: 34.92

GC content: 26.36

Gene sequence:

>459_bases
ATGAAGAAAAAGGTTGCTATCTCTATTACAACTTTAGTAATAATATTTTTAATATCTATAGTATATCTAGGGTTGTATCA
TAATGACTATGTTGGAGAAAATAAGTCATTAAACAAAGAAGTTATAAGTATTATAGAAGGTGAAGAGGATAAAAAGCTAG
ACTTAATTTCTTTAAATAAAAATATAGCTTTTGAATGGGATGAGGTTTATTTAATAGCTCCATACCAAGATGTAAGTGAT
TTTTTAAAAGAGATGAATGCTTACGCACCAGAAAAAACATACACCTCAGAAATAAATGATGTGTACATGCTAGCTTTTAC
TAAGTATTCTGACAAACTAGGGAAAAACAAACTAATAGAATATACTTATATACCAGGAACTTATATCGATTCTGAAAAGT
TAAAAGATATGGAAGTTATAAATGGAAATTATTATTATGCAAATGATAATTTAGTTTAG

Upstream 100 bases:

>100_bases
ATATAATGACCATGTAATATGTGGTAAAATTAAAGTAAGATATAGTAAAATATATCTTACTTTTTTTAAAAGGAAATTTT
ATTTTTGAGAGGTGGTCTGT

Downstream 100 bases:

>100_bases
ATTTTAAAGCTCTAAGTTTAAAACTTAGGGCTTTTTTTAATTAAGAATTAATTTAAAAATAAAAATATTAATAAAATTGC
TTTAATATTCATATATTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKKKVAISITTLVIIFLISIVYLGLYHNDYVGENKSLNKEVISIIEGEEDKKLDLISLNKNIAFEWDEVYLIAPYQDVSD
FLKEMNAYAPEKTYTSEINDVYMLAFTKYSDKLGKNKLIEYTYIPGTYIDSEKLKDMEVINGNYYYANDNLV

Sequences:

>Translated_152_residues
MKKKVAISITTLVIIFLISIVYLGLYHNDYVGENKSLNKEVISIIEGEEDKKLDLISLNKNIAFEWDEVYLIAPYQDVSD
FLKEMNAYAPEKTYTSEINDVYMLAFTKYSDKLGKNKLIEYTYIPGTYIDSEKLKDMEVINGNYYYANDNLV
>Mature_152_residues
MKKKVAISITTLVIIFLISIVYLGLYHNDYVGENKSLNKEVISIIEGEEDKKLDLISLNKNIAFEWDEVYLIAPYQDVSD
FLKEMNAYAPEKTYTSEINDVYMLAFTKYSDKLGKNKLIEYTYIPGTYIDSEKLKDMEVINGNYYYANDNLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17630; Mature: 17630

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKVAISITTLVIIFLISIVYLGLYHNDYVGENKSLNKEVISIIEGEEDKKLDLISLNK
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECC
NIAFEWDEVYLIAPYQDVSDFLKEMNAYAPEKTYTSEINDVYMLAFTKYSDKLGKNKLIE
CEEEEECCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHCCCCCEEE
YTYIPGTYIDSEKLKDMEVINGNYYYANDNLV
EEECCCCEECCCCCCCEEEECCEEEEECCCCC
>Mature Secondary Structure
MKKKVAISITTLVIIFLISIVYLGLYHNDYVGENKSLNKEVISIIEGEEDKKLDLISLNK
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECC
NIAFEWDEVYLIAPYQDVSDFLKEMNAYAPEKTYTSEINDVYMLAFTKYSDKLGKNKLIE
CEEEEECCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHCCCCCEEE
YTYIPGTYIDSEKLKDMEVINGNYYYANDNLV
EEECCCCEECCCCCCCEEEECCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA