Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is bdhA [H]

Identifier: 18309840

GI number: 18309840

Start: 1051286

End: 1052458

Strand: Direct

Name: bdhA [H]

Synonym: CPE0858

Alternate gene names: 18309840

Gene position: 1051286-1052458 (Clockwise)

Preceding gene: 18309838

Following gene: 18309841

Centisome position: 34.68

GC content: 31.46

Gene sequence:

>1173_bases
ATGAATAATTTTACTTTTTATAATCCTACTAAAATTAACTTTGGTAGAGGAGTTGAATCCTCTGTTGGAGAAGAGATTAA
AAGCTTAGGAGCTAGTAAAGTGCTTTTTCATTATGGTGGAGGAAGTATTAGAAAAAATGGGTTATATGATAGAATTTTAG
ATTCTTTAAATAAAGCAGGATTACATGTAATAGAACTTGGAGGAGTTAAGCCTAATCCTAGATTAAGCTTAGTTAAAAAG
GGAATAGAACTTTGTAAAAATAGTAAAGTTGATTTTATACTTGCAGTTGGAGGAGGAAGTGTTATTGACTCAGCTAAAGC
CATAGCTCTTGGTGTTCCTTATGATGGAGATGTATGGGATTTCTTTACTAAAAATATTAAAATAGAAAAAGCTTTACCAT
TAGGTACAGTATTAACAATACCAGCGGCAGGAAGTGAATCAAGCTCAGGAACTGTTATAACTAATGAAGATGGATGGTAT
AAGAGATCAACAGGATCACCACTTCTATATCCTAAATTTTCAATGTTAAATCCAGAACTATGCTTTACTTTACCAGAATA
TCAAATAGCATCAGGAAGTGCAGATATTTTAGCACATTTAATGGAAAGATATTTCACAAACACAAAGAATGTTGAACTTA
TAGATAGATTAATTGAGGGAACAATGAAAACAGTAATAAATAATGTTCCTAAGGTATTAAAAAATAAGGAAGACTATGAT
AGCTTTGCAGAGGTTATGTGGGCTGGAACAATAGCACATAATAATCTTTTAAGCACAGGAAGAGAAACAGATTGGGCATC
ACATAATATAGAACATGAATTAAGTGGAATATATGATGTTACTCATGGTGCAGGATTAGCTGTTATATTCCCAGCTTGGA
TGAAGTTTGTTTATAAGCATGATTTAGATAGATTCAACCAATTTGCTACTAGAGTATTTGATGTTCAAGTTGAAGATAAA
ACTAAGGAAGAGGTTGCCTTAGAAGGAATTAAGAAACTTGAAGAATTCTTCAAATCAATAAATCTTCCAGTAACTTTAAA
AGAGTTAGAAATAGGTGAAGATAGATTAGAAGAAATGGCTAAAAAATGCACAGATAATGATGAGCATACAGTAGGTCATT
TTGTAGAATTAAACACAGAGGACATCCTTGAAATATACAAATTAGCTTTATAG

Upstream 100 bases:

>100_bases
ATATATTTATATAATCTTTTACTTAAAATTAAAAGTGATATATAATATTGTAAACGTAATTAATTCAAATAATATGGAAA
AAAGAGAAAGGGTGAGTTAA

Downstream 100 bases:

>100_bases
GATATTTTACCCTTAAGAAAATAAATAATAGCAAGTAGGAAAATAACTATATGTAAAATAGTATGGTATGTATCAAAATA
ACTTTTTAATAAAACTTTTA

Product: NADH-dependent butanol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MNNFTFYNPTKINFGRGVESSVGEEIKSLGASKVLFHYGGGSIRKNGLYDRILDSLNKAGLHVIELGGVKPNPRLSLVKK
GIELCKNSKVDFILAVGGGSVIDSAKAIALGVPYDGDVWDFFTKNIKIEKALPLGTVLTIPAAGSESSSGTVITNEDGWY
KRSTGSPLLYPKFSMLNPELCFTLPEYQIASGSADILAHLMERYFTNTKNVELIDRLIEGTMKTVINNVPKVLKNKEDYD
SFAEVMWAGTIAHNNLLSTGRETDWASHNIEHELSGIYDVTHGAGLAVIFPAWMKFVYKHDLDRFNQFATRVFDVQVEDK
TKEEVALEGIKKLEEFFKSINLPVTLKELEIGEDRLEEMAKKCTDNDEHTVGHFVELNTEDILEIYKLAL

Sequences:

>Translated_390_residues
MNNFTFYNPTKINFGRGVESSVGEEIKSLGASKVLFHYGGGSIRKNGLYDRILDSLNKAGLHVIELGGVKPNPRLSLVKK
GIELCKNSKVDFILAVGGGSVIDSAKAIALGVPYDGDVWDFFTKNIKIEKALPLGTVLTIPAAGSESSSGTVITNEDGWY
KRSTGSPLLYPKFSMLNPELCFTLPEYQIASGSADILAHLMERYFTNTKNVELIDRLIEGTMKTVINNVPKVLKNKEDYD
SFAEVMWAGTIAHNNLLSTGRETDWASHNIEHELSGIYDVTHGAGLAVIFPAWMKFVYKHDLDRFNQFATRVFDVQVEDK
TKEEVALEGIKKLEEFFKSINLPVTLKELEIGEDRLEEMAKKCTDNDEHTVGHFVELNTEDILEIYKLAL
>Mature_390_residues
MNNFTFYNPTKINFGRGVESSVGEEIKSLGASKVLFHYGGGSIRKNGLYDRILDSLNKAGLHVIELGGVKPNPRLSLVKK
GIELCKNSKVDFILAVGGGSVIDSAKAIALGVPYDGDVWDFFTKNIKIEKALPLGTVLTIPAAGSESSSGTVITNEDGWY
KRSTGSPLLYPKFSMLNPELCFTLPEYQIASGSADILAHLMERYFTNTKNVELIDRLIEGTMKTVINNVPKVLKNKEDYD
SFAEVMWAGTIAHNNLLSTGRETDWASHNIEHELSGIYDVTHGAGLAVIFPAWMKFVYKHDLDRFNQFATRVFDVQVEDK
TKEEVALEGIKKLEEFFKSINLPVTLKELEIGEDRLEEMAKKCTDNDEHTVGHFVELNTEDILEIYKLAL

Specific function: Unknown

COG id: COG1979

COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789386, Length=395, Percent_Identity=35.6962025316456, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1789163, Length=401, Percent_Identity=24.6882793017456, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI48994951, Length=351, Percent_Identity=24.7863247863248, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87082107, Length=333, Percent_Identity=24.3243243243243, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787493, Length=306, Percent_Identity=24.1830065359477, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17537053, Length=201, Percent_Identity=25.3731343283582, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321181, Length=388, Percent_Identity=26.0309278350515, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 43420; Mature: 43420

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00060 ADH_IRON_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFTFYNPTKINFGRGVESSVGEEIKSLGASKVLFHYGGGSIRKNGLYDRILDSLNKAG
CCCCEECCCCEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC
LHVIELGGVKPNPRLSLVKKGIELCKNSKVDFILAVGGGSVIDSAKAIALGVPYDGDVWD
EEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHCCCCEEEEECCCCCCHHH
FFTKNIKIEKALPLGTVLTIPAAGSESSSGTVITNEDGWYKRSTGSPLLYPKFSMLNPEL
HHHCCEEEEECCCCCEEEEEECCCCCCCCCCEEECCCCCEECCCCCCEECCCHHHCCCHH
CFTLPEYQIASGSADILAHLMERYFTNTKNVELIDRLIEGTMKTVINNVPKVLKNKEDYD
EEECCCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SFAEVMWAGTIAHNNLLSTGRETDWASHNIEHELSGIYDVTHGAGLAVIFPAWMKFVYKH
HHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
DLDRFNQFATRVFDVQVEDKTKEEVALEGIKKLEEFFKSINLPVTLKELEIGEDRLEEMA
HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHH
KKCTDNDEHTVGHFVELNTEDILEIYKLAL
HHCCCCCCCCCCEEEEECHHHHHHHHHHCC
>Mature Secondary Structure
MNNFTFYNPTKINFGRGVESSVGEEIKSLGASKVLFHYGGGSIRKNGLYDRILDSLNKAG
CCCCEECCCCEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC
LHVIELGGVKPNPRLSLVKKGIELCKNSKVDFILAVGGGSVIDSAKAIALGVPYDGDVWD
EEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHCCCCEEEEECCCCCCHHH
FFTKNIKIEKALPLGTVLTIPAAGSESSSGTVITNEDGWYKRSTGSPLLYPKFSMLNPEL
HHHCCEEEEECCCCCEEEEEECCCCCCCCCCEEECCCCCEECCCCCCEECCCHHHCCCHH
CFTLPEYQIASGSADILAHLMERYFTNTKNVELIDRLIEGTMKTVINNVPKVLKNKEDYD
EEECCCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SFAEVMWAGTIAHNNLLSTGRETDWASHNIEHELSGIYDVTHGAGLAVIFPAWMKFVYKH
HHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
DLDRFNQFATRVFDVQVEDKTKEEVALEGIKKLEEFFKSINLPVTLKELEIGEDRLEEMA
HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHH
KKCTDNDEHTVGHFVELNTEDILEIYKLAL
HHCCCCCCCCCCEEEEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]