| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309829
Identifier: 18309829
GI number: 18309829
Start: 1035447
End: 1036241
Strand: Direct
Name: 18309829
Synonym: CPE0847
Alternate gene names: NA
Gene position: 1035447-1036241 (Clockwise)
Preceding gene: 18309828
Following gene: 18309830
Centisome position: 34.16
GC content: 19.37
Gene sequence:
>795_bases ATGAATTTTTTTAAGAAAAATAAAATTGCTATAATATCTATAGCAATAATTATAATTTTTGTAGTCTTGTTATTAATCGG TATTCATCATTATTTTGGAGATTATTTTAAATATTCTGAATGGGTTACATTATTATTAAATAGTATAATATCAATTGCTG GAATTATAGGAACAGTTATAACCATTTTGATAGCAATTACTTCAATAAATAATGAAAAAAGAAATAATGAATTACAGAAA AGAAAGATAGCTATTATTTTAGAGTATGAAATTAACAGTTTTTTATCTTCTCTTTTTGATACTTTTTATCTTTTTTTAGA TAGTTGGAACTATTATAATTTTAATGATTTAGAAAAACCAACTTTTCAAGAAGATAATTTAAATATGTTAAGTTTGGATT TTAAAGAAACATTATATGAATTAATATCTATTGAAGAAAGTTTAGAGAGCTTAGAAACTTTTGAGTTCTTCAAAACATAT AAAAATTGCATACAAAAGTTAGATAAATTTAATGATGATGGTGAGAGAAAAATTTTTTTTATAAATAATTTTATGGATAT TTTTAAATTTTCTTTTTCCAATGAATATTTACAAGCTTTAAATTTATCAAAATATAGAACTCATGGAATTGCGCATAATT ATTTACCGATAAATGATGAAGAAAAAGAAATATTGAAAGCATTTTATAATAATAAAGTAGATTTATATAAGAGTGATAGT AAAGATAATTTATTAAAAAAAGAGTATAGTGAAAGATTAATAAATATATTGGAATATTTAAATTCATTAAAATGA
Upstream 100 bases:
>100_bases AATATAGGAAAGAGAAAAGATTATTGAATTAGTTGCGGAGTTTAGAGGTGCATTACTTAATATTAGTTGATAATATATAA TATTTTATAGGAGGTGTTAT
Downstream 100 bases:
>100_bases TAAATATTTGATAAAAGAATGATAAATTTTAATTAAATTTAATATTAGAATTAATAGTGTGGATATGGTAAAACTTTCAT TGAATCTTCCTAGATATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVITILIAITSINNEKRNNELQK RKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKPTFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTY KNCIQKLDKFNDDGERKIFFINNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS KDNLLKKEYSERLINILEYLNSLK
Sequences:
>Translated_264_residues MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVITILIAITSINNEKRNNELQK RKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKPTFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTY KNCIQKLDKFNDDGERKIFFINNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS KDNLLKKEYSERLINILEYLNSLK >Mature_264_residues MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVITILIAITSINNEKRNNELQK RKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKPTFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTY KNCIQKLDKFNDDGERKIFFINNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS KDNLLKKEYSERLINILEYLNSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31382; Mature: 31382
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TILIAITSINNEKRNNELQKRKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKP HHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTYKNCIQKLDKFNDDGERKIFF CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE INNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCC KDNLLKKEYSERLINILEYLNSLK HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TILIAITSINNEKRNNELQKRKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKP HHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTYKNCIQKLDKFNDDGERKIFF CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE INNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCC KDNLLKKEYSERLINILEYLNSLK HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA