Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309829

Identifier: 18309829

GI number: 18309829

Start: 1035447

End: 1036241

Strand: Direct

Name: 18309829

Synonym: CPE0847

Alternate gene names: NA

Gene position: 1035447-1036241 (Clockwise)

Preceding gene: 18309828

Following gene: 18309830

Centisome position: 34.16

GC content: 19.37

Gene sequence:

>795_bases
ATGAATTTTTTTAAGAAAAATAAAATTGCTATAATATCTATAGCAATAATTATAATTTTTGTAGTCTTGTTATTAATCGG
TATTCATCATTATTTTGGAGATTATTTTAAATATTCTGAATGGGTTACATTATTATTAAATAGTATAATATCAATTGCTG
GAATTATAGGAACAGTTATAACCATTTTGATAGCAATTACTTCAATAAATAATGAAAAAAGAAATAATGAATTACAGAAA
AGAAAGATAGCTATTATTTTAGAGTATGAAATTAACAGTTTTTTATCTTCTCTTTTTGATACTTTTTATCTTTTTTTAGA
TAGTTGGAACTATTATAATTTTAATGATTTAGAAAAACCAACTTTTCAAGAAGATAATTTAAATATGTTAAGTTTGGATT
TTAAAGAAACATTATATGAATTAATATCTATTGAAGAAAGTTTAGAGAGCTTAGAAACTTTTGAGTTCTTCAAAACATAT
AAAAATTGCATACAAAAGTTAGATAAATTTAATGATGATGGTGAGAGAAAAATTTTTTTTATAAATAATTTTATGGATAT
TTTTAAATTTTCTTTTTCCAATGAATATTTACAAGCTTTAAATTTATCAAAATATAGAACTCATGGAATTGCGCATAATT
ATTTACCGATAAATGATGAAGAAAAAGAAATATTGAAAGCATTTTATAATAATAAAGTAGATTTATATAAGAGTGATAGT
AAAGATAATTTATTAAAAAAAGAGTATAGTGAAAGATTAATAAATATATTGGAATATTTAAATTCATTAAAATGA

Upstream 100 bases:

>100_bases
AATATAGGAAAGAGAAAAGATTATTGAATTAGTTGCGGAGTTTAGAGGTGCATTACTTAATATTAGTTGATAATATATAA
TATTTTATAGGAGGTGTTAT

Downstream 100 bases:

>100_bases
TAAATATTTGATAAAAGAATGATAAATTTTAATTAAATTTAATATTAGAATTAATAGTGTGGATATGGTAAAACTTTCAT
TGAATCTTCCTAGATATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVITILIAITSINNEKRNNELQK
RKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKPTFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTY
KNCIQKLDKFNDDGERKIFFINNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS
KDNLLKKEYSERLINILEYLNSLK

Sequences:

>Translated_264_residues
MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVITILIAITSINNEKRNNELQK
RKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKPTFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTY
KNCIQKLDKFNDDGERKIFFINNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS
KDNLLKKEYSERLINILEYLNSLK
>Mature_264_residues
MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVITILIAITSINNEKRNNELQK
RKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKPTFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTY
KNCIQKLDKFNDDGERKIFFINNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS
KDNLLKKEYSERLINILEYLNSLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31382; Mature: 31382

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILIAITSINNEKRNNELQKRKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKP
HHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTYKNCIQKLDKFNDDGERKIFF
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
INNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCC
KDNLLKKEYSERLINILEYLNSLK
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFFKKNKIAIISIAIIIIFVVLLLIGIHHYFGDYFKYSEWVTLLLNSIISIAGIIGTVI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILIAITSINNEKRNNELQKRKIAIILEYEINSFLSSLFDTFYLFLDSWNYYNFNDLEKP
HHHHHHHHCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TFQEDNLNMLSLDFKETLYELISIEESLESLETFEFFKTYKNCIQKLDKFNDDGERKIFF
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
INNFMDIFKFSFSNEYLQALNLSKYRTHGIAHNYLPINDEEKEILKAFYNNKVDLYKSDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCC
KDNLLKKEYSERLINILEYLNSLK
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA