Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309830

Identifier: 18309830

GI number: 18309830

Start: 1036701

End: 1037438

Strand: Direct

Name: 18309830

Synonym: CPE0848

Alternate gene names: NA

Gene position: 1036701-1037438 (Clockwise)

Preceding gene: 18309829

Following gene: 18309831

Centisome position: 34.2

GC content: 22.09

Gene sequence:

>738_bases
ATGAAAAATTGGACAAATAGAGATTGGGGTTGGCTAACTTCTATATTAGTTGGAATTATTATAATAATATTGACGTGGAG
ATTAAATGATAATGATAATATTGTTAATATTATTTCTATGTTTGCAAGTGGAGCATCAATAATACTAGCAGTAGTTGCTA
TAGTACAAAGTACTATTTATAATAGTAGTTCAAATGAATTAAATGCAAAAATGACAGAGAAATTATCTCTTTTAGAGAAC
AATGTTGAATTTGTCAAAGAAAATATTTTGAATAATGCTAATAAAATTATTGAAAGAGCTCCTATAGATGAAGATATTAA
GCAAGAAATTAAAAATGATTTATCTAATAGCATAGAAGAGAATAGAAGAAATATTAATACTTTTTTTAGTGAATATGTAA
TCGAAGACTTAGTTTATAATAGATTTGTAAAAGTATATGGAAATACATATGATGTTAAAAAAATCAATGAAGGTATAGTT
CTTAAAAATAATAATAAAGAAATAATTATTGAAATTAAAACTTGCATAAATCGTAGTTTAGCATCGATGTTTAAAAGTAT
TAAAAATTTTGAGTTGAAAAATAATAATGTAAATAGAATTCTATTATTAATAATAGATAATAATAGATCAAGAATGACTT
TAAATAATAACTATACTAGACTATTATCACCTAATGAAATTTTGGATTCTAATGATTCTGAATTTAAAGAAAAGATGAAA
ATTGAAGAACTCTCTTAA

Upstream 100 bases:

>100_bases
AAATAACCTCTGGATTACGGAAAAGAATTTAGTTTCTGCTAGGTTCTTTTTATTTTGATTTTTGTAAAACTTTACCTTAT
AATATTTTTGAGGTGAGTAT

Downstream 100 bases:

>100_bases
GAGAGTTCTTTTTATTTTACTTAAAAGTAGAAATGTCTATGAGTGATTTAAATAAATTAAAAGTTACTTTAGATGTTAGA
AAATTAGATAATATTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKNWTNRDWGWLTSILVGIIIIILTWRLNDNDNIVNIISMFASGASIILAVVAIVQSTIYNSSSNELNAKMTEKLSLLEN
NVEFVKENILNNANKIIERAPIDEDIKQEIKNDLSNSIEENRRNINTFFSEYVIEDLVYNRFVKVYGNTYDVKKINEGIV
LKNNNKEIIIEIKTCINRSLASMFKSIKNFELKNNNVNRILLLIIDNNRSRMTLNNNYTRLLSPNEILDSNDSEFKEKMK
IEELS

Sequences:

>Translated_245_residues
MKNWTNRDWGWLTSILVGIIIIILTWRLNDNDNIVNIISMFASGASIILAVVAIVQSTIYNSSSNELNAKMTEKLSLLEN
NVEFVKENILNNANKIIERAPIDEDIKQEIKNDLSNSIEENRRNINTFFSEYVIEDLVYNRFVKVYGNTYDVKKINEGIV
LKNNNKEIIIEIKTCINRSLASMFKSIKNFELKNNNVNRILLLIIDNNRSRMTLNNNYTRLLSPNEILDSNDSEFKEKMK
IEELS
>Mature_245_residues
MKNWTNRDWGWLTSILVGIIIIILTWRLNDNDNIVNIISMFASGASIILAVVAIVQSTIYNSSSNELNAKMTEKLSLLEN
NVEFVKENILNNANKIIERAPIDEDIKQEIKNDLSNSIEENRRNINTFFSEYVIEDLVYNRFVKVYGNTYDVKKINEGIV
LKNNNKEIIIEIKTCINRSLASMFKSIKNFELKNNNVNRILLLIIDNNRSRMTLNNNYTRLLSPNEILDSNDSEFKEKMK
IEELS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28399; Mature: 28399

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNWTNRDWGWLTSILVGIIIIILTWRLNDNDNIVNIISMFASGASIILAVVAIVQSTIY
CCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
NSSSNELNAKMTEKLSLLENNVEFVKENILNNANKIIERAPIDEDIKQEIKNDLSNSIEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NRRNINTFFSEYVIEDLVYNRFVKVYGNTYDVKKINEGIVLKNNNKEIIIEIKTCINRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEECCCCEEEECCCCEEEEEEHHHHHHHH
ASMFKSIKNFELKNNNVNRILLLIIDNNRSRMTLNNNYTRLLSPNEILDSNDSEFKEKMK
HHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEECCCEEEECCCHHHHCCCCHHHHHHHH
IEELS
HHCCC
>Mature Secondary Structure
MKNWTNRDWGWLTSILVGIIIIILTWRLNDNDNIVNIISMFASGASIILAVVAIVQSTIY
CCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
NSSSNELNAKMTEKLSLLENNVEFVKENILNNANKIIERAPIDEDIKQEIKNDLSNSIEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NRRNINTFFSEYVIEDLVYNRFVKVYGNTYDVKKINEGIVLKNNNKEIIIEIKTCINRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEECCCCEEEECCCCEEEEEEHHHHHHHH
ASMFKSIKNFELKNNNVNRILLLIIDNNRSRMTLNNNYTRLLSPNEILDSNDSEFKEKMK
HHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEECCCEEEECCCHHHHCCCCHHHHHHHH
IEELS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA