Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309785

Identifier: 18309785

GI number: 18309785

Start: 985384

End: 985761

Strand: Direct

Name: 18309785

Synonym: CPE0803

Alternate gene names: NA

Gene position: 985384-985761 (Clockwise)

Preceding gene: 18309784

Following gene: 18309786

Centisome position: 32.51

GC content: 28.04

Gene sequence:

>378_bases
GTGGTTTGTATGAGAGAATATAATAAGGAAAGATTAAGAAAAGCAATTGAATTATGGTATAGGGAGGAAGGGGTAAGAAT
AATTAAAGATAGAGTTGAGCATTATTTGAAGTTTTATCCTGTAAAGCCTAGAAGCATAAAGGTTAAAGAGCAAAAGAGAA
GATGGGGTAGCTGTACATATTATAATGATTTACTTTTTAATTGGAGATGCATCATGGCACCTTTAAAAGTAGTTGATTAT
ATAGTTGTTCATGAAATGACACATATGGTTCATAAGGATCATTCAAAAAATTATTGGAATTTTGTTTCAAAAATTATTCC
AAATTATAAAGAACAAAAAATGTGGTTAAAAGAAAATGGAATTATAATGGATATATGA

Upstream 100 bases:

>100_bases
GGAGATTTATTTATGTATTTAGGAAATGAATATTCATTAAAAATAAAGTTTAGTCCATTTTTAATGAGGATTTCTGTTAG
GATAATAGGAAAAAGAATTA

Downstream 100 bases:

>100_bases
CAGGGATAAATAGTATTAAAATTAATATAAAGGATAATTTTAGTATTTTTATAATTAATAAGATAGAAATTATTTAATTA
ATATTATATACTGTATATGG

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Metallopeptidases-Like Protein; Metal-Dependent Hydrolase Family Protein; Metalloprotease; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTYYNDLLFNWRCIMAPLKVVDY
IVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENGIIMDI

Sequences:

>Translated_125_residues
MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTYYNDLLFNWRCIMAPLKVVDY
IVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENGIIMDI
>Mature_125_residues
MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTYYNDLLFNWRCIMAPLKVVDY
IVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENGIIMDI

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15559; Mature: 15559

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTY
CCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCH
YNDLLFNWRCIMAPLKVVDYIVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCC
IIMDI
EEEEC
>Mature Secondary Structure
MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTY
CCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCH
YNDLLFNWRCIMAPLKVVDYIVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCC
IIMDI
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA