| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309785
Identifier: 18309785
GI number: 18309785
Start: 985384
End: 985761
Strand: Direct
Name: 18309785
Synonym: CPE0803
Alternate gene names: NA
Gene position: 985384-985761 (Clockwise)
Preceding gene: 18309784
Following gene: 18309786
Centisome position: 32.51
GC content: 28.04
Gene sequence:
>378_bases GTGGTTTGTATGAGAGAATATAATAAGGAAAGATTAAGAAAAGCAATTGAATTATGGTATAGGGAGGAAGGGGTAAGAAT AATTAAAGATAGAGTTGAGCATTATTTGAAGTTTTATCCTGTAAAGCCTAGAAGCATAAAGGTTAAAGAGCAAAAGAGAA GATGGGGTAGCTGTACATATTATAATGATTTACTTTTTAATTGGAGATGCATCATGGCACCTTTAAAAGTAGTTGATTAT ATAGTTGTTCATGAAATGACACATATGGTTCATAAGGATCATTCAAAAAATTATTGGAATTTTGTTTCAAAAATTATTCC AAATTATAAAGAACAAAAAATGTGGTTAAAAGAAAATGGAATTATAATGGATATATGA
Upstream 100 bases:
>100_bases GGAGATTTATTTATGTATTTAGGAAATGAATATTCATTAAAAATAAAGTTTAGTCCATTTTTAATGAGGATTTCTGTTAG GATAATAGGAAAAAGAATTA
Downstream 100 bases:
>100_bases CAGGGATAAATAGTATTAAAATTAATATAAAGGATAATTTTAGTATTTTTATAATTAATAAGATAGAAATTATTTAATTA ATATTATATACTGTATATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Metallopeptidases-Like Protein; Metal-Dependent Hydrolase Family Protein; Metalloprotease; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTYYNDLLFNWRCIMAPLKVVDY IVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENGIIMDI
Sequences:
>Translated_125_residues MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTYYNDLLFNWRCIMAPLKVVDY IVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENGIIMDI >Mature_125_residues MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTYYNDLLFNWRCIMAPLKVVDY IVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENGIIMDI
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15559; Mature: 15559
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTY CCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCH YNDLLFNWRCIMAPLKVVDYIVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCC IIMDI EEEEC >Mature Secondary Structure MVCMREYNKERLRKAIELWYREEGVRIIKDRVEHYLKFYPVKPRSIKVKEQKRRWGSCTY CCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCH YNDLLFNWRCIMAPLKVVDYIVVHEMTHMVHKDHSKNYWNFVSKIIPNYKEQKMWLKENG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCC IIMDI EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA