| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309784
Identifier: 18309784
GI number: 18309784
Start: 985047
End: 985406
Strand: Direct
Name: 18309784
Synonym: CPE0802
Alternate gene names: NA
Gene position: 985047-985406 (Clockwise)
Preceding gene: 18309783
Following gene: 18309785
Centisome position: 32.49
GC content: 27.5
Gene sequence:
>360_bases ATGATATTAAAATTTCAATATGAAAATAAAATTATAGATTTTGAATTAATATTAAGTAAAAGAAAAACTATGAGCATAGA GATTTCCGCTGAGGGAGAAGTAAAAGTAAGAGCCCCTGTTGGGATTTCAGAGGAAGTAATTATTAGTCAGGTTAGGGAAA AAGGAAAGTGGATTCTTGAAAAGAGAGAAGAGGCTTACAAGCGTAATTCTAAAAAGGTTGAAAAAAACTATAAAGATGGA GATTTATTTATGTATTTAGGAAATGAATATTCATTAAAAATAAAGTTTAGTCCATTTTTAATGAGGATTTCTGTTAGGAT AATAGGAAAAAGAATTAGTGGTTTGTATGAGAGAATATAA
Upstream 100 bases:
>100_bases TTTTTTATTTATATGATTTTTTATACAGAAATAAAATTAAAATAGCATTATTTGGTATAATTAACTTTGTTAAAATGTGA AAAATTACAGAGAGGTTTTT
Downstream 100 bases:
>100_bases TAAGGAAAGATTAAGAAAAGCAATTGAATTATGGTATAGGGAGGAAGGGGTAAGAATAATTAAAGATAGAGTTGAGCATT ATTTGAAGTTTTATCCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MILKFQYENKIIDFELILSKRKTMSIEISAEGEVKVRAPVGISEEVIISQVREKGKWILEKREEAYKRNSKKVEKNYKDG DLFMYLGNEYSLKIKFSPFLMRISVRIIGKRISGLYERI
Sequences:
>Translated_119_residues MILKFQYENKIIDFELILSKRKTMSIEISAEGEVKVRAPVGISEEVIISQVREKGKWILEKREEAYKRNSKKVEKNYKDG DLFMYLGNEYSLKIKFSPFLMRISVRIIGKRISGLYERI >Mature_119_residues MILKFQYENKIIDFELILSKRKTMSIEISAEGEVKVRAPVGISEEVIISQVREKGKWILEKREEAYKRNSKKVEKNYKDG DLFMYLGNEYSLKIKFSPFLMRISVRIIGKRISGLYERI
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14068; Mature: 14068
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKFQYENKIIDFELILSKRKTMSIEISAEGEVKVRAPVGISEEVIISQVREKGKWILE CEEEEECCCEEEEHEEEECCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCHHHHH KREEAYKRNSKKVEKNYKDGDLFMYLGNEYSLKIKFSPFLMRISVRIIGKRISGLYERI HHHHHHHCCCHHHHCCCCCCCEEEEECCEEEEEEEECCEEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MILKFQYENKIIDFELILSKRKTMSIEISAEGEVKVRAPVGISEEVIISQVREKGKWILE CEEEEECCCEEEEHEEEECCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCHHHHH KREEAYKRNSKKVEKNYKDGDLFMYLGNEYSLKIKFSPFLMRISVRIIGKRISGLYERI HHHHHHHCCCHHHHCCCCCCCEEEEECCEEEEEEEECCEEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA