Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309688

Identifier: 18309688

GI number: 18309688

Start: 879423

End: 880265

Strand: Direct

Name: 18309688

Synonym: CPE0706

Alternate gene names: NA

Gene position: 879423-880265 (Clockwise)

Preceding gene: 18309687

Following gene: 18309689

Centisome position: 29.01

GC content: 22.54

Gene sequence:

>843_bases
ATGGTTAAAATTAATAAAAAAGTAATTTGGATATTTGTGATTATTGGAATTATATTTGTGGGAATTAGTTCTACTGATTT
AGTTGAAGAAAATGAAACTATAAGTTTTCCTTATGAGTTTGAGGTTGATAATTACAACATTGAAATTGAGTATTCTAAGC
TTTATGATAATTATTTGTTGACTAAATATAAGATATGGAGAAAAGATGGTTCTTATATAGGGGAAAATGAAGCAAATTTA
TCTACATTCATAACTAAATATGATAGTGCGTTTAGTTTTGGACCACATATTATTTCATCAAAAGTAATTGATAATAAAAT
TAAAGAAGAAATAAGTATAGATTTTGTTGCTGCAATAGAAAAGCCCTTAGAAAAAGTGAAAATTAGACATGCCTTAGCTG
GAAAGTATATTGATGGAACTAAAGAGATTAAAAAAGAAGGAGTTGTTAATTTAAGTAATGAAAATTATATACGTTTAAAT
AAAAAAATTAAAATAGATGATATAAATTTAACTGTTAGTAATTTAGGAAATTTTGAATTTGGATCTATTTTAAATTTATT
TACTGAAAACTTAGAAGATGAAGAAGTTGAAAATTTTCATGAAAATTATAGTATTAAATTAAAATCAAATGATTTTAGTA
AAATATATGAAATTAAGCAAATGATGATTCTTCGTGGCAAAGCTGCAGAGGAAGTTATTAAATGGAATAAATTAAATAAG
GATACTAAGCTTATAGAATTTTTTATAGTTGACTTATTATATGATGTAGATTCAATTGATTTTAATAATTTTGAGCTTTT
TGTTGTTAATAAAAATACCAATGAAGAAACAAAAATTTATTAA

Upstream 100 bases:

>100_bases
AGTTAATACTTTATTCTTGATTTGAATAAAGTATTAACTTTTTTTATTTGGTATTTATGGGTTTTATTAGGATGATAAAA
TAGAAAAAAGGAGATTGAAA

Downstream 100 bases:

>100_bases
GTAGTTAAAAAGTAATACTTTAGTCCTATATTATTTAATATGTTTAAAAATAGTGTGAAAAATGGTAATATTTTATGTAA
CAGTAAATTTTAACATGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLLTKYKIWRKDGSYIGENEANL
STFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIEKPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLN
KKIKIDDINLTVSNLGNFEFGSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK
DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY

Sequences:

>Translated_280_residues
MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLLTKYKIWRKDGSYIGENEANL
STFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIEKPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLN
KKIKIDDINLTVSNLGNFEFGSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK
DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY
>Mature_280_residues
MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLLTKYKIWRKDGSYIGENEANL
STFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIEKPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLN
KKIKIDDINLTVSNLGNFEFGSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK
DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32709; Mature: 32709

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLL
CEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEECCEEEEEEEHHHHCCHHH
TKYKIWRKDGSYIGENEANLSTFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIE
EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLNKKIKIDDINLTVSNLGNFEF
HHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCEEEECCEEEEEEEEEEEECCCCCCH
GSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK
HHHHHHHHCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLL
CEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEECCEEEEEEEHHHHCCHHH
TKYKIWRKDGSYIGENEANLSTFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIE
EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLNKKIKIDDINLTVSNLGNFEF
HHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCEEEECCEEEEEEEEEEEECCCCCCH
GSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK
HHHHHHHHCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA