| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309651
Identifier: 18309651
GI number: 18309651
Start: 832865
End: 833872
Strand: Direct
Name: 18309651
Synonym: CPE0669
Alternate gene names: NA
Gene position: 832865-833872 (Clockwise)
Preceding gene: 18309650
Following gene: 18309654
Centisome position: 27.47
GC content: 25.2
Gene sequence:
>1008_bases ATGGCACATAAAAAGGTGGCAAAAATAATAGCAACTGCTATAGTAGTAAATAACCTCTCCAGTAGCGTAGTTTTAGGCAA AGAAGTAAATTTAATAGAGAAAAACAAAGATAATTCAGTTATAAATCAAAATATAAGTCATAGTAAAAGATATAATAATA TTTTTAGAATAGAAAAAACAGTAGGAAATACAGAGGAATTCTTAAAAATAATAAATGATGGGAACTTAGAAGAAATAAAA TTATCGAGGGATATTGACCTTAGCAATTTAATTTCTAGTGGAGTAGATATTAAGAGTTCAAATGTTGTAATAGATGGTCA AGGATATAGTATCTATGTTCCTAAATTAGCTGAAAATCTTAATAGAGATTTTTTTACACTACAGGGAGATGGGATTGTGC TAAAAAATTTAAATATAGTGTGTAAGGATAATGAAGATTTAAACAATAATAACCTTATTACTATATCAGGAGATGACATA ACTTTAGAAAATGTTTTCATAGAATCTAACTTTAATAGAGCAGTAAACATTTTAGAGGGAAATAATATTCATATTAATGA TTGTAAAATAGTAAATAATCAAGAAAAGGGTAATGGATTAAAGGTTGAAAATGGAATAGTAACCTTAAATAATCTTGATT TACAAAATAAATCTGGAGTTGGACTTGACATTTTAGGAAAAGATTCAAAGGTTTATTTAAAAGGAGATATAAAAATAAAT TCTCCAATTGAAATAAGGGGGCAATTTAGAGATGGTGGAATTTTAAATTGTGACAACAATCAGTTAATCCACGAAAAAAG AGTCTTTGGATATACTTATTATAATGTTGCAAAGGAAACAGAGTTAGTTAGAAATAAAGATGAGTTTTTAGAAGCAATAG ATAATAATATAGTTAAAAATATAAAATTAATGGACAATATTGATTTAAGAGGACATGAATCAGAATATTATAAAGTTTTT GAAAAAGAAATAAAGGTTGATAAAAATAATTATCATATAACAATGTAA
Upstream 100 bases:
>100_bases TCAAAAAAATCTATAATTTATTTTTGAAAACCTATACAAAAAATGATATAATTAGTTCATAATAGAAATATAAAAAATAA TAAGAAGAGGTGAGTTTAGT
Downstream 100 bases:
>100_bases AGTTTAAAGGTATCTAAACGGAGTCAAATCTCAGCGTTTAGATACCTTTTATAGTATAATATATAATTTGCTATTTAAAA GTGTTAATTATTAAGATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MAHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKTVGNTEEFLKIINDGNLEEIK LSRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENLNRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDI TLENVFIESNFNRAVNILEGNNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKIN SPIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKNIKLMDNIDLRGHESEYYKVF EKEIKVDKNNYHITM
Sequences:
>Translated_335_residues MAHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKTVGNTEEFLKIINDGNLEEIK LSRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENLNRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDI TLENVFIESNFNRAVNILEGNNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKIN SPIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKNIKLMDNIDLRGHESEYYKVF EKEIKVDKNNYHITM >Mature_334_residues AHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKTVGNTEEFLKIINDGNLEEIKL SRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENLNRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDIT LENVFIESNFNRAVNILEGNNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKINS PIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKNIKLMDNIDLRGHESEYYKVFE KEIKVDKNNYHITM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37813; Mature: 37682
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKT CCHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCCHHCCCCCHHHHCCCEEEEEEC VGNTEEFLKIINDGNLEEIKLSRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENL CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCEECCCEEEECCCCEEECCHHHHHC NRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDITLENVFIESNFNRAVNILEG CCCEEEEECCCEEEECCEEEECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEEEEC NNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKIN CEEEEEEEEEECCCCCCCCEEEECCEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEC SPIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKN CCEEEEEEECCCCEEECCCCCEEEEHEEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHE IKLMDNIDLRGHESEYYKVFEKEIKVDKNNYHITM EEEEECCCCCCCCHHHHHHHHHHHEECCCCEEEEC >Mature Secondary Structure AHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKT CHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCCHHCCCCCHHHHCCCEEEEEEC VGNTEEFLKIINDGNLEEIKLSRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENL CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCEECCCEEEECCCCEEECCHHHHHC NRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDITLENVFIESNFNRAVNILEG CCCEEEEECCCEEEECCEEEECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEEEEC NNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKIN CEEEEEEEEEECCCCCCCCEEEECCEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEC SPIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKN CCEEEEEEECCCCEEECCCCCEEEEHEEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHE IKLMDNIDLRGHESEYYKVFEKEIKVDKNNYHITM EEEEECCCCCCCCHHHHHHHHHHHEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA