| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yjjI [C]
Identifier: 18309641
GI number: 18309641
Start: 823205
End: 824698
Strand: Direct
Name: yjjI [C]
Synonym: CPE0659
Alternate gene names: 18309641
Gene position: 823205-824698 (Clockwise)
Preceding gene: 18309640
Following gene: 18309642
Centisome position: 27.16
GC content: 31.46
Gene sequence:
>1494_bases ATGAACAGAGTATTAGATATACTAAAGGATAGGTCATTAACATATCATCAGCAAATTAAAGATTTAGCTGCTTATGCAGA AAGCACAATTGAAGTGTTAAATATTGATGATGAAACAAAGAAATTAATAGATGAAGGGTGTATATGCACTCTTTTTGAGG GTAATGCACCATTTAGGCCTAGATACATAATTCCAGATTATTCTTTACTTATGGAAAAGGGATGTGAATTTTTAAATCTT TCAGTTCCAGAGGATATATGGGAAGCAACTAATAACCTATTAATTTTCTATAAGCATGTGCCTTCAATAACTACATTTCC AGTTTACCTTGGAAATATAGATGAGCTTTTAGAGCCATTTATAGAAGATGAAAGGGAAGCTAAAAGAGCAATTAAATTAT TTTTAAAGCACATAGATAGAACATTAACTGATTCTTTTGTACATGCTAATATAGGGCCAAGAGAGACTGTAGCAGGAAGA TTAATACTAGAGTCTATGGATGAACTTCAATGTGCAGTTCCAAATTTAAGTATGAAGTATGATTTAGAAAATACTCCAGA GAGTTTTATAAATTTATGTGCAAAGGTTGCTTTAAGCACAGCTAAACCTAGTTTTGCAAATCATAAAATGGATGTGAAAA GCTTTGGAACAGATAGATATGCTATAGCAAGTTGCTATAATGGATTTCATATTGGTGGGGGTGGATATACCCTTGTAAGA ATAAAATTAAATGAGGTAGCTAAGAAGGCTACTTCAGTAGAGGACTTTTTAGAGAATGTATTACCTTATGTGAGCACTAA AATGATTCAGTATATTGATGAAAGAATAAGATTTTTAGTTGAGGAAACTCAGTTCTTTACTTCTAATTTTTTAGTAAAAG AAGGATTTATTCAGAAAAAATTATTTACAGGAATGTTTGGAGTAGTAGGTCTAGCAGAGGCTGTAAATACTTTATTAGGA GCAGAGAAACAAAGTGATAGATTTGGGTATTCAGAAAAAGCTAATAAACTTGGATTAAGAATAATAGAGAAATTAAATAA AATAGTATCAGAACATGAAGCTAAACATGTAAATTGCTTTGGAGGACACTATGTTCTTCATGCACAAGTAGGAATTGATT TAGATCAAAATGTATCACCAGGATGTAGAATACCAGTTGGAGAAGAACCAGAATTATTTAATCATATAATGCAATCAGCA CCATTCCATAAATATTTTTATAATGGAATAGGAGATATATTTGTATTTGAAGATACATATAATGATCATCCAGAAGCCTT AGTTGATATTATAAAGGGTGCCTTTAATTCAGGAATAAGATACATGTCTGTTTATGGAAGTGGAGCAGATGTAGTAAGGG TAACTGGATATTTAGCTAAGCGTTCAGAGGTGGAGAAACTTGAAAGAGGAGAGGCTGTTCTTAATAATACAGACTTATTT GCCATGGGAGCAAAGAATAATTGTCATGCATTTGAAAGAAAAATTAGAAAGTAA
Upstream 100 bases:
>100_bases ATATTCAAATATATTAAATTATAATTAAGTTTGATTTTCTTACAATTTATTTAAAAATACTAAATTAATATACTTGTATG TTTTAAGGGAGATGAAAAGT
Downstream 100 bases:
>100_bases GTGATATTATGGCTTTAATAAATAAGATAATTCCATTTTCTTGTGTTGATGGACCAGGAAATAGAATGGTTATATTTTTT CAAGGATGTAATTTTAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MNRVLDILKDRSLTYHQQIKDLAAYAESTIEVLNIDDETKKLIDEGCICTLFEGNAPFRPRYIIPDYSLLMEKGCEFLNL SVPEDIWEATNNLLIFYKHVPSITTFPVYLGNIDELLEPFIEDEREAKRAIKLFLKHIDRTLTDSFVHANIGPRETVAGR LILESMDELQCAVPNLSMKYDLENTPESFINLCAKVALSTAKPSFANHKMDVKSFGTDRYAIASCYNGFHIGGGGYTLVR IKLNEVAKKATSVEDFLENVLPYVSTKMIQYIDERIRFLVEETQFFTSNFLVKEGFIQKKLFTGMFGVVGLAEAVNTLLG AEKQSDRFGYSEKANKLGLRIIEKLNKIVSEHEAKHVNCFGGHYVLHAQVGIDLDQNVSPGCRIPVGEEPELFNHIMQSA PFHKYFYNGIGDIFVFEDTYNDHPEALVDIIKGAFNSGIRYMSVYGSGADVVRVTGYLAKRSEVEKLERGEAVLNNTDLF AMGAKNNCHAFERKIRK
Sequences:
>Translated_497_residues MNRVLDILKDRSLTYHQQIKDLAAYAESTIEVLNIDDETKKLIDEGCICTLFEGNAPFRPRYIIPDYSLLMEKGCEFLNL SVPEDIWEATNNLLIFYKHVPSITTFPVYLGNIDELLEPFIEDEREAKRAIKLFLKHIDRTLTDSFVHANIGPRETVAGR LILESMDELQCAVPNLSMKYDLENTPESFINLCAKVALSTAKPSFANHKMDVKSFGTDRYAIASCYNGFHIGGGGYTLVR IKLNEVAKKATSVEDFLENVLPYVSTKMIQYIDERIRFLVEETQFFTSNFLVKEGFIQKKLFTGMFGVVGLAEAVNTLLG AEKQSDRFGYSEKANKLGLRIIEKLNKIVSEHEAKHVNCFGGHYVLHAQVGIDLDQNVSPGCRIPVGEEPELFNHIMQSA PFHKYFYNGIGDIFVFEDTYNDHPEALVDIIKGAFNSGIRYMSVYGSGADVVRVTGYLAKRSEVEKLERGEAVLNNTDLF AMGAKNNCHAFERKIRK >Mature_497_residues MNRVLDILKDRSLTYHQQIKDLAAYAESTIEVLNIDDETKKLIDEGCICTLFEGNAPFRPRYIIPDYSLLMEKGCEFLNL SVPEDIWEATNNLLIFYKHVPSITTFPVYLGNIDELLEPFIEDEREAKRAIKLFLKHIDRTLTDSFVHANIGPRETVAGR LILESMDELQCAVPNLSMKYDLENTPESFINLCAKVALSTAKPSFANHKMDVKSFGTDRYAIASCYNGFHIGGGGYTLVR IKLNEVAKKATSVEDFLENVLPYVSTKMIQYIDERIRFLVEETQFFTSNFLVKEGFIQKKLFTGMFGVVGLAEAVNTLLG AEKQSDRFGYSEKANKLGLRIIEKLNKIVSEHEAKHVNCFGGHYVLHAQVGIDLDQNVSPGCRIPVGEEPELFNHIMQSA PFHKYFYNGIGDIFVFEDTYNDHPEALVDIIKGAFNSGIRYMSVYGSGADVVRVTGYLAKRSEVEKLERGEAVLNNTDLF AMGAKNNCHAFERKIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjjI [H]
Homologues:
Organism=Escherichia coli, GI1790840, Length=499, Percent_Identity=39.8797595190381, Blast_Score=382, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016905 [H]
Pfam domain/function: PF11230 DUF3029 [H]
EC number: NA
Molecular weight: Translated: 56216; Mature: 56216
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVLDILKDRSLTYHQQIKDLAAYAESTIEVLNIDDETKKLIDEGCICTLFEGNAPFRP CCHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCEEEEECCCCCCCC RYIIPDYSLLMEKGCEFLNLSVPEDIWEATNNLLIFYKHVPSITTFPVYLGNIDELLEPF CEECCCHHHHHHCCCCEEECCCCHHHHHCCCCEEEEEECCCCCEEHHHHCCCHHHHHHHH IEDEREAKRAIKLFLKHIDRTLTDSFVHANIGPRETVAGRLILESMDELQCAVPNLSMKY HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE DLENTPESFINLCAKVALSTAKPSFANHKMDVKSFGTDRYAIASCYNGFHIGGGGYTLVR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCEEECCCCEEEEE IKLNEVAKKATSVEDFLENVLPYVSTKMIQYIDERIRFLVEETQFFTSNFLVKEGFIQKK EEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFTGMFGVVGLAEAVNTLLGAEKQSDRFGYSEKANKLGLRIIEKLNKIVSEHEAKHVNCF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE GGHYVLHAQVGIDLDQNVSPGCRIPVGEEPELFNHIMQSAPFHKYFYNGIGDIFVFEDTY CCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEECCC NDHPEALVDIIKGAFNSGIRYMSVYGSGADVVRVTGYLAKRSEVEKLERGEAVLNNTDLF CCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCEE AMGAKNNCHAFERKIRK EECCCCCHHHHHHHHCC >Mature Secondary Structure MNRVLDILKDRSLTYHQQIKDLAAYAESTIEVLNIDDETKKLIDEGCICTLFEGNAPFRP CCHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCEEEEECCCCCCCC RYIIPDYSLLMEKGCEFLNLSVPEDIWEATNNLLIFYKHVPSITTFPVYLGNIDELLEPF CEECCCHHHHHHCCCCEEECCCCHHHHHCCCCEEEEEECCCCCEEHHHHCCCHHHHHHHH IEDEREAKRAIKLFLKHIDRTLTDSFVHANIGPRETVAGRLILESMDELQCAVPNLSMKY HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE DLENTPESFINLCAKVALSTAKPSFANHKMDVKSFGTDRYAIASCYNGFHIGGGGYTLVR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCEEECCCCEEEEE IKLNEVAKKATSVEDFLENVLPYVSTKMIQYIDERIRFLVEETQFFTSNFLVKEGFIQKK EEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFTGMFGVVGLAEAVNTLLGAEKQSDRFGYSEKANKLGLRIIEKLNKIVSEHEAKHVNCF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE GGHYVLHAQVGIDLDQNVSPGCRIPVGEEPELFNHIMQSAPFHKYFYNGIGDIFVFEDTY CCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEECCC NDHPEALVDIIKGAFNSGIRYMSVYGSGADVVRVTGYLAKRSEVEKLERGEAVLNNTDLF CCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCEE AMGAKNNCHAFERKIRK EECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]