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The map label for this gene is yjjW [H]

Identifier: 18309642

GI number: 18309642

Start: 824764

End: 825528

Strand: Direct

Name: yjjW [H]

Synonym: CPE0660

Alternate gene names: 18309642

Gene position: 824764-825528 (Clockwise)

Preceding gene: 18309641

Following gene: 18309643

Centisome position: 27.21

GC content: 28.1

Gene sequence:

>765_bases
ATGGTTATATTTTTTCAAGGATGTAATTTTAAGTGTTTGTATTGCCACAATCCTGAAACTATAAATAAATGCACCTCTTG
TGGAAAATGCGTTGAAAATTGTGAAGTAGGTGCCTTATCAATTAGTGAGGGGAAAGTTATTTGGGATGAGGAAGAATGTA
TTTCTTGTGATAAATGTATAAAGCTATGCGAGCATATGTCTTCTCCTAAACTTAAGGAATATTCAGTAGAAGAGCTTGTA
AAAAAGATAGAAAAAGATAGTTTTTTTATAAGAGGAATAACTGTTAGTGGTGGAGAATGCACTTTAAACTCTGAATTTTT
AATAAAACTTTTTAGAGAAGTTAAAAAACTTGGATTGACTTGCTTTGTTGATACTAATGGTAATACTAAATTAGATGATG
AACTTATAAATCTTACAGATAAGTTTATGCTTGATGTTAAGTCAATTGATGAAAAAGAAAATATTTGGCTAACTAAATCA
TCAAATAAATTAGTTTTAGAAAATTTAAAAAAATTATTAGAGTTAGACAAGATGTATGAAGTTAGAACTGTTATAGCTAA
AGGACTAAATAGCGAAAAAACAGTGGATGAAGTATCTAAAATCATTGGTGATAAATGTAGATATAAACTTATAAAATATA
GACCCTTTGGAGTTAGAGAAGAGGGGATAAAGGTTCATGGAACTATAAGCCCAGAAGATAGCTATATGAATGAATTAAAA
GAAAAATCTATAGCTAATGGATGTATTGATACAATAATAACTTAA

Upstream 100 bases:

>100_bases
ATTGTCATGCATTTGAAAGAAAAATTAGAAAGTAAGTGATATTATGGCTTTAATAAATAAGATAATTCCATTTTCTTGTG
TTGATGGACCAGGAAATAGA

Downstream 100 bases:

>100_bases
TATTTTTTTAGCTAAGTAAATTTTATTTATTATTTTAATCGTAAATTATTTTAATTTTTTATTTGTGTAAATGTTAATAG
ATAATTTTATTTAAATATTA

Product: 4Fe-4S binding domain protein/radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MVIFFQGCNFKCLYCHNPETINKCTSCGKCVENCEVGALSISEGKVIWDEEECISCDKCIKLCEHMSSPKLKEYSVEELV
KKIEKDSFFIRGITVSGGECTLNSEFLIKLFREVKKLGLTCFVDTNGNTKLDDELINLTDKFMLDVKSIDEKENIWLTKS
SNKLVLENLKKLLELDKMYEVRTVIAKGLNSEKTVDEVSKIIGDKCRYKLIKYRPFGVREEGIKVHGTISPEDSYMNELK
EKSIANGCIDTIIT

Sequences:

>Translated_254_residues
MVIFFQGCNFKCLYCHNPETINKCTSCGKCVENCEVGALSISEGKVIWDEEECISCDKCIKLCEHMSSPKLKEYSVEELV
KKIEKDSFFIRGITVSGGECTLNSEFLIKLFREVKKLGLTCFVDTNGNTKLDDELINLTDKFMLDVKSIDEKENIWLTKS
SNKLVLENLKKLLELDKMYEVRTVIAKGLNSEKTVDEVSKIIGDKCRYKLIKYRPFGVREEGIKVHGTISPEDSYMNELK
EKSIANGCIDTIIT
>Mature_254_residues
MVIFFQGCNFKCLYCHNPETINKCTSCGKCVENCEVGALSISEGKVIWDEEECISCDKCIKLCEHMSSPKLKEYSVEELV
KKIEKDSFFIRGITVSGGECTLNSEFLIKLFREVKKLGLTCFVDTNGNTKLDDELINLTDKFMLDVKSIDEKENIWLTKS
SNKLVLENLKKLLELDKMYEVRTVIAKGLNSEKTVDEVSKIIGDKCRYKLIKYRPFGVREEGIKVHGTISPEDSYMNELK
EKSIANGCIDTIIT

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1790839, Length=243, Percent_Identity=34.156378600823, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1790389, Length=263, Percent_Identity=25.0950570342205, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787130, Length=257, Percent_Identity=27.2373540856031, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011352
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 28891; Mature: 28891

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIFFQGCNFKCLYCHNPETINKCTSCGKCVENCEVGALSISEGKVIWDEEECISCDKCI
CEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEECHHHHCCHHHHH
KLCEHMSSPKLKEYSVEELVKKIEKDSFFIRGITVSGGECTLNSEFLIKLFREVKKLGLT
HHHHHCCCCCCHHCCHHHHHHHHCCCCEEEEEEEECCCCEEECHHHHHHHHHHHHHCCEE
CFVDTNGNTKLDDELINLTDKFMLDVKSIDEKENIWLTKSSNKLVLENLKKLLELDKMYE
EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
VRTVIAKGLNSEKTVDEVSKIIGDKCRYKLIKYRPFGVREEGIKVHGTISPEDSYMNELK
HHHHHHHCCCCCHHHHHHHHHHCCHHHEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHH
EKSIANGCIDTIIT
HHHHHHHHHHHHCC
>Mature Secondary Structure
MVIFFQGCNFKCLYCHNPETINKCTSCGKCVENCEVGALSISEGKVIWDEEECISCDKCI
CEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEECHHHHCCHHHHH
KLCEHMSSPKLKEYSVEELVKKIEKDSFFIRGITVSGGECTLNSEFLIKLFREVKKLGLT
HHHHHCCCCCCHHCCHHHHHHHHCCCCEEEEEEEECCCCEEECHHHHHHHHHHHHHCCEE
CFVDTNGNTKLDDELINLTDKFMLDVKSIDEKENIWLTKSSNKLVLENLKKLLELDKMYE
EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
VRTVIAKGLNSEKTVDEVSKIIGDKCRYKLIKYRPFGVREEGIKVHGTISPEDSYMNELK
HHHHHHHCCCCCHHHHHHHHHHCCHHHEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHH
EKSIANGCIDTIIT
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]