| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is pstS1 [H]
Identifier: 18309619
GI number: 18309619
Start: 799800
End: 800618
Strand: Direct
Name: pstS1 [H]
Synonym: CPE0637
Alternate gene names: 18309619
Gene position: 799800-800618 (Clockwise)
Preceding gene: 18309618
Following gene: 18309620
Centisome position: 26.38
GC content: 32.48
Gene sequence:
>819_bases ATGAATAGGAGAAGAGTAGTAATTGCATTAAGCAGTATTTTAGCAATGGGATTTTTATTAACAGGATGTGGTGGAGGATC AAGAGCTAATATAATAAAAATTTCAGGCTCAAGTTCAGTAGGACCATTAGTAGAGGCTGAAGCAGAAGTTTTTAAAAAGG ATATGCCAGATATTACTGTTGAGGTAAATCAATTAGGATCATCAGCAGGAATAAAAGATGCTATAAATGGAACTGTAGAG ATAGGAATTTCTTCAAGAGATTTAAAGGAAAAGGAATTGGAATCTGGAATTAAAGAAAAACCTATTGCCTATGATGGGAT GTCAGTAATAATTAACAATGAAAATCCAGTGCAAAATCTTACAATGGAGCAGATTAGGGATATATATACAGGGAAAATAA CAAACTGGAAAGAGGTTGGTGGAGAAGATACTCCAATAGTATTAGTTTCAAGGGAAGATGGATCAGGAACAAGAGATGCC TTCCAAGAAATTGTTGGATTCAATTCAGAGGAAATAAGTCCACAGGCTCAGATTTCAGATGGTTCTGGAAGTATTAAAAC AATGGTATCAGGAAATAAGAATGCAATAGGATATATATCCTTTAGTTACGTAGATAATTCAGTGCATGCAGTTAGCATTG ATGGAGTAAAGCCTACAGCCGAAAATGTGCAAAATAAAATGTACAAGCTATCAAGACCATTTTTATTAGTATATAAAGAG GAAAATTTAAATGAAAATTCAAAGAAATTTATAGATTTTATAATGAGTAAAGAAGGACAAGAAATAGTTGAAGAAGATGG ATTAATAAGTGTAACTTAA
Upstream 100 bases:
>100_bases ATAAGATTAATCTTGTAAGCGAAACAAAAATATAAAATTAAATAAAAATAAATTATTAGATTTTAAAATGTATATTAAAT TTATATAAGCGGAGGAAAAA
Downstream 100 bases:
>100_bases AGCTTATTTATTAAAGAGAATTAATTTAAGAAAAATGCTAAAGATATATTTATTGGAGATTAATTTAAGGTGGAGGTAAA TATGGAAGCTAAAAGTCAGA
Product: phosphate ABC transporter phosphate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MNRRRVVIALSSILAMGFLLTGCGGGSRANIIKISGSSSVGPLVEAEAEVFKKDMPDITVEVNQLGSSAGIKDAINGTVE IGISSRDLKEKELESGIKEKPIAYDGMSVIINNENPVQNLTMEQIRDIYTGKITNWKEVGGEDTPIVLVSREDGSGTRDA FQEIVGFNSEEISPQAQISDGSGSIKTMVSGNKNAIGYISFSYVDNSVHAVSIDGVKPTAENVQNKMYKLSRPFLLVYKE ENLNENSKKFIDFIMSKEGQEIVEEDGLISVT
Sequences:
>Translated_272_residues MNRRRVVIALSSILAMGFLLTGCGGGSRANIIKISGSSSVGPLVEAEAEVFKKDMPDITVEVNQLGSSAGIKDAINGTVE IGISSRDLKEKELESGIKEKPIAYDGMSVIINNENPVQNLTMEQIRDIYTGKITNWKEVGGEDTPIVLVSREDGSGTRDA FQEIVGFNSEEISPQAQISDGSGSIKTMVSGNKNAIGYISFSYVDNSVHAVSIDGVKPTAENVQNKMYKLSRPFLLVYKE ENLNENSKKFIDFIMSKEGQEIVEEDGLISVT >Mature_272_residues MNRRRVVIALSSILAMGFLLTGCGGGSRANIIKISGSSSVGPLVEAEAEVFKKDMPDITVEVNQLGSSAGIKDAINGTVE IGISSRDLKEKELESGIKEKPIAYDGMSVIINNENPVQNLTMEQIRDIYTGKITNWKEVGGEDTPIVLVSREDGSGTRDA FQEIVGFNSEEISPQAQISDGSGSIKTMVSGNKNAIGYISFSYVDNSVHAVSIDGVKPTAENVQNKMYKLSRPFLLVYKE ENLNENSKKFIDFIMSKEGQEIVEEDGLISVT
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29491; Mature: 29491
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRRVVIALSSILAMGFLLTGCGGGSRANIIKISGSSSVGPLVEAEAEVFKKDMPDITV CCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEE EVNQLGSSAGIKDAINGTVEIGISSRDLKEKELESGIKEKPIAYDGMSVIINNENPVQNL EEECCCCCCCCHHHCCCEEEEECCCCCCHHHHHHCCCCCCCEEECCEEEEECCCCCCHHC TMEQIRDIYTGKITNWKEVGGEDTPIVLVSREDGSGTRDAFQEIVGFNSEEISPQAQISD CHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEECC GSGSIKTMVSGNKNAIGYISFSYVDNSVHAVSIDGVKPTAENVQNKMYKLSRPFLLVYKE CCCCEEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEC ENLNENSKKFIDFIMSKEGQEIVEEDGLISVT CCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEC >Mature Secondary Structure MNRRRVVIALSSILAMGFLLTGCGGGSRANIIKISGSSSVGPLVEAEAEVFKKDMPDITV CCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEE EVNQLGSSAGIKDAINGTVEIGISSRDLKEKELESGIKEKPIAYDGMSVIINNENPVQNL EEECCCCCCCCHHHCCCEEEEECCCCCCHHHHHHCCCCCCCEEECCEEEEECCCCCCHHC TMEQIRDIYTGKITNWKEVGGEDTPIVLVSREDGSGTRDAFQEIVGFNSEEISPQAQISD CHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEECC GSGSIKTMVSGNKNAIGYISFSYVDNSVHAVSIDGVKPTAENVQNKMYKLSRPFLLVYKE CCCCEEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEC ENLNENSKKFIDFIMSKEGQEIVEEDGLISVT CCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]