Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is pstS1 [H]

Identifier: 18309618

GI number: 18309618

Start: 798746

End: 799576

Strand: Direct

Name: pstS1 [H]

Synonym: CPE0636

Alternate gene names: 18309618

Gene position: 798746-799576 (Clockwise)

Preceding gene: 18309617

Following gene: 18309619

Centisome position: 26.35

GC content: 33.81

Gene sequence:

>831_bases
ATGTTTAAAAAGAGATTAATAGCAATTATAGGTACTATATTTATAGGTGCAACAGCCATGGTTGGATGTAATTCTGGAGG
AAGCGAAGCAAAATCTACAAATTCAGTTAGTATATCTGGATCAACTTCTGTAGGGCCAGTTATGGAAGCAGAGGCAGAGG
CTTTTAAGACTAAGAAACCAGATGTATCTATAGAAATAAATCAAATAGGATCATCAGCAGGCATTAAAAATGCCATGGAG
GGAGTTTCAGAAATAGGAATGGCTTCCCGTGACCTTAAGGGAGAAGAAAAACAAGCAGGACTTAAAGAAGTAGAAATAGC
TTATGATGGAATAGCTTTAATAACACATAAAAATAATCCAGTGAAGGATTTAACATTAGCTCAGATAAAAGACATATATA
CAGGAAAAATAACAAATTGGAAAGAACTTGGAGGGAATGATGCTCCAATAGTGGTTGTTTCTAGAGAGGATGGATCTGGA
ACAAGAGATGCTTTCCAAGAAATAGTAGGATTTAAGGCTGAAGAGTTAACTGTTAATTCTCAGATATCAGATGGATCAGG
AAATATCAAGTCCTTAGTTCAAGGTAATGAAAATGCAATAGGATATATATCTTTTAGTTATGTTGATGATAGTGTAAGTG
CAGTAAAGGTTGATGGAGTTGAAGCAACACCGGAAAATGTTTTAAATAAATCTTACAAAGTTTCAAGACCTTTCTTAGCA
GTATATAAGGAAGAAAATTTAACAGAATCAGGTAAGAGCTTTATAGATTTCATATTAAGTGAGGAAGGGCAAGACATAGT
AGCTAAAGAACACTTAATAAAAGTAAAATAG

Upstream 100 bases:

>100_bases
ATTAACATAGACTTAACCTTAGCATAATTTCCTTTTAACATTGAGAAGATAATATAAGAGTGTACTCAATATTAACTGAG
ATTTTGGAGGTAATTTAAAT

Downstream 100 bases:

>100_bases
TTCGCTTATATATTTAATATACATTTAATCCTAAGAATAGATTATTTATATTCTTAGGATTTTTTTATTAGATTTTTTTA
CATAGATTTAACATAGAAAT

Product: phosphate ABC transporter phosphate-binding protein

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: PBP 1 [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MFKKRLIAIIGTIFIGATAMVGCNSGGSEAKSTNSVSISGSTSVGPVMEAEAEAFKTKKPDVSIEINQIGSSAGIKNAME
GVSEIGMASRDLKGEEKQAGLKEVEIAYDGIALITHKNNPVKDLTLAQIKDIYTGKITNWKELGGNDAPIVVVSREDGSG
TRDAFQEIVGFKAEELTVNSQISDGSGNIKSLVQGNENAIGYISFSYVDDSVSAVKVDGVEATPENVLNKSYKVSRPFLA
VYKEENLTESGKSFIDFILSEEGQDIVAKEHLIKVK

Sequences:

>Translated_276_residues
MFKKRLIAIIGTIFIGATAMVGCNSGGSEAKSTNSVSISGSTSVGPVMEAEAEAFKTKKPDVSIEINQIGSSAGIKNAME
GVSEIGMASRDLKGEEKQAGLKEVEIAYDGIALITHKNNPVKDLTLAQIKDIYTGKITNWKELGGNDAPIVVVSREDGSG
TRDAFQEIVGFKAEELTVNSQISDGSGNIKSLVQGNENAIGYISFSYVDDSVSAVKVDGVEATPENVLNKSYKVSRPFLA
VYKEENLTESGKSFIDFILSEEGQDIVAKEHLIKVK
>Mature_276_residues
MFKKRLIAIIGTIFIGATAMVGCNSGGSEAKSTNSVSISGSTSVGPVMEAEAEAFKTKKPDVSIEINQIGSSAGIKNAME
GVSEIGMASRDLKGEEKQAGLKEVEIAYDGIALITHKNNPVKDLTLAQIKDIYTGKITNWKELGGNDAPIVVVSREDGSG
TRDAFQEIVGFKAEELTVNSQISDGSGNIKSLVQGNENAIGYISFSYVDDSVSAVKVDGVEATPENVLNKSYKVSRPFLA
VYKEENLTESGKSFIDFILSEEGQDIVAKEHLIKVK

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29433; Mature: 29433

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKRLIAIIGTIFIGATAMVGCNSGGSEAKSTNSVSISGSTSVGPVMEAEAEAFKTKKP
CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCC
DVSIEINQIGSSAGIKNAMEGVSEIGMASRDLKGEEKQAGLKEVEIAYDGIALITHKNNP
CEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEECCEEEEEECCCC
VKDLTLAQIKDIYTGKITNWKELGGNDAPIVVVSREDGSGTRDAFQEIVGFKAEELTVNS
CCHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHEEEEC
QISDGSGNIKSLVQGNENAIGYISFSYVDDSVSAVKVDGVEATPENVLNKSYKVSRPFLA
CCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEEECCCCCCHHHHHCCCEECCCCEEE
VYKEENLTESGKSFIDFILSEEGQDIVAKEHLIKVK
EEECCCCCHHHHHHHHHHHCCCCCEEHHHCEEEECC
>Mature Secondary Structure
MFKKRLIAIIGTIFIGATAMVGCNSGGSEAKSTNSVSISGSTSVGPVMEAEAEAFKTKKP
CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCC
DVSIEINQIGSSAGIKNAMEGVSEIGMASRDLKGEEKQAGLKEVEIAYDGIALITHKNNP
CEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEECCEEEEEECCCC
VKDLTLAQIKDIYTGKITNWKELGGNDAPIVVVSREDGSGTRDAFQEIVGFKAEELTVNS
CCHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHEEEEC
QISDGSGNIKSLVQGNENAIGYISFSYVDDSVSAVKVDGVEATPENVLNKSYKVSRPFLA
CCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEEECCCCCCHHHHHCCCEECCCCEEE
VYKEENLTESGKSFIDFILSEEGQDIVAKEHLIKVK
EEECCCCCHHHHHHHHHHHCCCCCEEHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]