Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yqgH [H]

Identifier: 18309620

GI number: 18309620

Start: 800700

End: 801587

Strand: Direct

Name: yqgH [H]

Synonym: CPE0638

Alternate gene names: 18309620

Gene position: 800700-801587 (Clockwise)

Preceding gene: 18309619

Following gene: 18309621

Centisome position: 26.41

GC content: 32.77

Gene sequence:

>888_bases
ATGGAAGCTAAAAGTCAGAATAATAAGAGTAAATATTTCATAGAAAGCTTAACTGAAAAGATATTTTTAATTAGTGCCTC
AGTAGCTGTAATAAGCTTACTTTTAATAATAGGATTTGTTTTTTATAAAGGGTTAAGACCATTCATAGTAGAAGGATACT
CCTTCTGGGATTTCATATTTGGTACACAATGGATACCAAGTGCAAATAAATATGGAATATTACCTATGATTGTGGCTTCT
TTAGGTGCTACAATAGGAGCTTTATTAATAGGTGTTCCTGTGGGAATATTAACATCAATATTCATAGCAGAGATAGCACC
AAAGAAAATAGCAAAAATTATGTCAGGAGCAGTAGAACTTTTAGCTGGAATACCTTCTGTTTTATATGGAGTATTTGGAT
TAGCAATAATAGTTCCTACAATACAAGATGTGTTTAACTTACCTAAAGGACAAAGTTTGCTAGCTGTAATAATAGTATTA
GCAATAATGATGTTACCGACGGTAATAACAGTATCAGAGACTGCTATAAGAGCTGTACCTAATGCATATAAAGAAGGATC
ATTAGCCTTAGGAGCATCAAAAACTGAAACAATATTTAAAGTTATTGTACCAGCGGCCAAATCAGGAATAATGACAGGGG
TAGTATTAGGAATAGGTAGAGCAATTGGAGAAACAATGGCAGTTATATTAGTAGCGGGAAATACACCTGTTATTCCAAGT
TCTATAATGGATAGTGTAAGACCTCTTACAACTAATATAGCCTTAGAAATGGGGTATGCATTTGGAACTCACCAAGAAAT
GCTATTTGCAACAGGGGTAGTATTATTTACATTCATATTAATACTAAACTTAGTACTTAGTAAACTTTCTAACAAGGGCG
GTAAATAA

Upstream 100 bases:

>100_bases
ATTAATAAGTGTAACTTAAAGCTTATTTATTAAAGAGAATTAATTTAAGAAAAATGCTAAAGATATATTTATTGGAGATT
AATTTAAGGTGGAGGTAAAT

Downstream 100 bases:

>100_bases
ATATGAGAAAAGTTAAAGATAATATATTAAATGGGTTAGTTTGGTTATCAGCCATATTTACAATAGGAATTCTTGTAATT
ATTTTAGGATTCATATTTGT

Product: phosphate ABC transporter permease

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MEAKSQNNKSKYFIESLTEKIFLISASVAVISLLLIIGFVFYKGLRPFIVEGYSFWDFIFGTQWIPSANKYGILPMIVAS
LGATIGALLIGVPVGILTSIFIAEIAPKKIAKIMSGAVELLAGIPSVLYGVFGLAIIVPTIQDVFNLPKGQSLLAVIIVL
AIMMLPTVITVSETAIRAVPNAYKEGSLALGASKTETIFKVIVPAAKSGIMTGVVLGIGRAIGETMAVILVAGNTPVIPS
SIMDSVRPLTTNIALEMGYAFGTHQEMLFATGVVLFTFILILNLVLSKLSNKGGK

Sequences:

>Translated_295_residues
MEAKSQNNKSKYFIESLTEKIFLISASVAVISLLLIIGFVFYKGLRPFIVEGYSFWDFIFGTQWIPSANKYGILPMIVAS
LGATIGALLIGVPVGILTSIFIAEIAPKKIAKIMSGAVELLAGIPSVLYGVFGLAIIVPTIQDVFNLPKGQSLLAVIIVL
AIMMLPTVITVSETAIRAVPNAYKEGSLALGASKTETIFKVIVPAAKSGIMTGVVLGIGRAIGETMAVILVAGNTPVIPS
SIMDSVRPLTTNIALEMGYAFGTHQEMLFATGVVLFTFILILNLVLSKLSNKGGK
>Mature_295_residues
MEAKSQNNKSKYFIESLTEKIFLISASVAVISLLLIIGFVFYKGLRPFIVEGYSFWDFIFGTQWIPSANKYGILPMIVAS
LGATIGALLIGVPVGILTSIFIAEIAPKKIAKIMSGAVELLAGIPSVLYGVFGLAIIVPTIQDVFNLPKGQSLLAVIIVL
AIMMLPTVITVSETAIRAVPNAYKEGSLALGASKTETIFKVIVPAAKSGIMTGVVLGIGRAIGETMAVILVAGNTPVIPS
SIMDSVRPLTTNIALEMGYAFGTHQEMLFATGVVLFTFILILNLVLSKLSNKGGK

Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0573

COG function: function code P; ABC-type phosphate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790164, Length=264, Percent_Identity=31.8181818181818, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790163, Length=214, Percent_Identity=28.9719626168224, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011864 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31252; Mature: 31252

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKSQNNKSKYFIESLTEKIFLISASVAVISLLLIIGFVFYKGLRPFIVEGYSFWDFIF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHH
GTQWIPSANKYGILPMIVASLGATIGALLIGVPVGILTSIFIAEIAPKKIAKIMSGAVEL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGIPSVLYGVFGLAIIVPTIQDVFNLPKGQSLLAVIIVLAIMMLPTVITVSETAIRAVP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NAYKEGSLALGASKTETIFKVIVPAAKSGIMTGVVLGIGRAIGETMAVILVAGNTPVIPS
CHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCH
SIMDSVRPLTTNIALEMGYAFGTHQEMLFATGVVLFTFILILNLVLSKLSNKGGK
HHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEAKSQNNKSKYFIESLTEKIFLISASVAVISLLLIIGFVFYKGLRPFIVEGYSFWDFIF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHH
GTQWIPSANKYGILPMIVASLGATIGALLIGVPVGILTSIFIAEIAPKKIAKIMSGAVEL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGIPSVLYGVFGLAIIVPTIQDVFNLPKGQSLLAVIIVLAIMMLPTVITVSETAIRAVP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NAYKEGSLALGASKTETIFKVIVPAAKSGIMTGVVLGIGRAIGETMAVILVAGNTPVIPS
CHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCH
SIMDSVRPLTTNIALEMGYAFGTHQEMLFATGVVLFTFILILNLVLSKLSNKGGK
HHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760913; 8969508; 9384377 [H]