| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yhiD [H]
Identifier: 18309574
GI number: 18309574
Start: 734586
End: 735311
Strand: Direct
Name: yhiD [H]
Synonym: CPE0592
Alternate gene names: 18309574
Gene position: 734586-735311 (Clockwise)
Preceding gene: 18309573
Following gene: 18309575
Centisome position: 24.23
GC content: 29.48
Gene sequence:
>726_bases ATGGGATTAACTTTAAGTTTTAAAGATATAATTATAAGGTTGTTATTAGCAACAATAGTTGGAGGGGTTATAGGTTATGA AAGAGAGTATCACAATAGAGCTGCTGGATTTAGAACACAAATATTAGTTTGTGTAGGCGCAGCTATAGTTTCTTTAATAG AAATAAGATTAGGTCAGGATGTGTTCGAAGCCATAAAAGATAATTATTATATAAGAAGTGTAATAAAAATTGATTATGCT AGATTGGGAGCTCAGGTCATTTCGGGAATTGGCTTTTTGGGCGCAGGAACAATATTACAAAACAAAGGATCAGTAAAAGG GTTAACAACTGCTGCATCACTATGGGTTGTGGCTTGTCTTGGTTTAGCTATTGGTATGGGGTATTATAACTTAGGCATTT TAGGATTTTTATTTATATTCTTAACCTTAGTAAGCTTAAAGAAGTTTCAATCTAAATTTATAACCAAGGCTGGAGAAAAA TGTTTTGAAATAATATATGAGAAAGATTCACAAGTTTTAGAGTTTATAGATAAGATTTTCACTCAAAAAGGTGTAAAGAT AAAAAGCATAGAGTTTTTGGGGAGAAATAACAACAATGAAGCTGCGCAATATAAAAATGCTATATATAGAGTTGAATTAC CTAACTATATAGAAGTTGGTGAAATAATAAATAAATTAAGTATAAATGATGGAATTATAAAAATAAGTGAATATAATGAC ATATAA
Upstream 100 bases:
>100_bases CTAAAATAAAAATATTCTAATATGAATTAAGACTAAATATTTTAACATTTATTTAGCATATCTTATAATAAGTTCATTTA AAGTATTTGAGGAGTTTATT
Downstream 100 bases:
>100_bases TAATGATTTATTGTAATTAAAATAAAGAAAAAATAAATTTAATACTTTGCTTTATAATTTGATATTTATGAAAATGTAGT TTTTTTCTACATAGTAAGAC
Product: Mg2+ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MGLTLSFKDIIIRLLLATIVGGVIGYEREYHNRAAGFRTQILVCVGAAIVSLIEIRLGQDVFEAIKDNYYIRSVIKIDYA RLGAQVISGIGFLGAGTILQNKGSVKGLTTAASLWVVACLGLAIGMGYYNLGILGFLFIFLTLVSLKKFQSKFITKAGEK CFEIIYEKDSQVLEFIDKIFTQKGVKIKSIEFLGRNNNNEAAQYKNAIYRVELPNYIEVGEIINKLSINDGIIKISEYND I
Sequences:
>Translated_241_residues MGLTLSFKDIIIRLLLATIVGGVIGYEREYHNRAAGFRTQILVCVGAAIVSLIEIRLGQDVFEAIKDNYYIRSVIKIDYA RLGAQVISGIGFLGAGTILQNKGSVKGLTTAASLWVVACLGLAIGMGYYNLGILGFLFIFLTLVSLKKFQSKFITKAGEK CFEIIYEKDSQVLEFIDKIFTQKGVKIKSIEFLGRNNNNEAAQYKNAIYRVELPNYIEVGEIINKLSINDGIIKISEYND I >Mature_240_residues GLTLSFKDIIIRLLLATIVGGVIGYEREYHNRAAGFRTQILVCVGAAIVSLIEIRLGQDVFEAIKDNYYIRSVIKIDYAR LGAQVISGIGFLGAGTILQNKGSVKGLTTAASLWVVACLGLAIGMGYYNLGILGFLFIFLTLVSLKKFQSKFITKAGEKC FEIIYEKDSQVLEFIDKIFTQKGVKIKSIEFLGRNNNNEAAQYKNAIYRVELPNYIEVGEIINKLSINDGIIKISEYNDI
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=192, Percent_Identity=32.8125, Blast_Score=100, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 26740; Mature: 26609
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTLSFKDIIIRLLLATIVGGVIGYEREYHNRAAGFRTQILVCVGAAIVSLIEIRLGQD CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH VFEAIKDNYYIRSVIKIDYARLGAQVISGIGFLGAGTILQNKGSVKGLTTAASLWVVACL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHH GLAIGMGYYNLGILGFLFIFLTLVSLKKFQSKFITKAGEKCFEIIYEKDSQVLEFIDKIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TQKGVKIKSIEFLGRNNNNEAAQYKNAIYRVELPNYIEVGEIINKLSINDGIIKISEYND HHCCCEEEEEEEECCCCCCHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCC I C >Mature Secondary Structure GLTLSFKDIIIRLLLATIVGGVIGYEREYHNRAAGFRTQILVCVGAAIVSLIEIRLGQD CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH VFEAIKDNYYIRSVIKIDYARLGAQVISGIGFLGAGTILQNKGSVKGLTTAASLWVVACL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHH GLAIGMGYYNLGILGFLFIFLTLVSLKKFQSKFITKAGEKCFEIIYEKDSQVLEFIDKIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TQKGVKIKSIEFLGRNNNNEAAQYKNAIYRVELPNYIEVGEIINKLSINDGIIKISEYND HHCCCEEEEEEEECCCCCCHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]